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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:21.8TPM
GTEx:12.1RPKM
FANTOM5:11.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA020091

 

Antibody HPA021815

 

Antibody HPA030388

 

Antibody CAB020682

 

Adipocytes

Not detected   Not detected   Not detected   Not detected  

Glandular cells

High   Medium   Low   Low  

Myoepithelial cells

Medium   Low   Low   Medium  
       
       
       

BREAST - HPA RNA-seq

Average TPM

21.8

overview Female, age 52
Sample 1
TPM: 18.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 20.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 24.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 23.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

12.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 12.1
Samples: 214

Max RPKM: 27.1
Min RPKM: 5.4
Std RPKM: 3.8
Median RPKM: 11.2
GTEX-13PVQ-1026-SM-5KM3M 27.1
GTEX-11TUW-1826-SM-5BC5D 26.8
GTEX-11WQK-2426-SM-5GU5C 25.6
GTEX-QEG5-0726-SM-4R1JQ 24.8
GTEX-U8XE-0826-SM-4E3J1 24.1
GTEX-ZTTD-1026-SM-51MRD 23.2
GTEX-13O3O-0826-SM-5K7WE 22.2
GTEX-11DZ1-0326-SM-5N9BN 21.5
GTEX-13S86-1226-SM-5S2OA 21.4
GTEX-RUSQ-2026-SM-4GIAK 21.4
GTEX-ZAJG-0626-SM-5HL8X 21.0
GTEX-ZA64-1526-SM-5CVMD 19.6
GTEX-11TT1-2126-SM-5GU5Y 19.3
GTEX-ZV7C-1826-SM-5NQ83 19.1
GTEX-13CF3-2126-SM-5IFJP 18.7
GTEX-ZY6K-1626-SM-5GZWV 18.5
GTEX-X261-0626-SM-3NMD9 18.2
GTEX-X4XY-0926-SM-4E3JD 18.2
GTEX-11P82-1326-SM-5HL62 18.1
GTEX-REY6-2426-SM-48FF5 17.7
GTEX-13O61-1826-SM-5KM4I 17.3
GTEX-Y5V6-2126-SM-4WWFX 17.2
GTEX-QEL4-2126-SM-447AE 17.0
GTEX-1211K-1926-SM-5EQLB 16.8
GTEX-ZLFU-2126-SM-4WWEV 16.7
GTEX-12WSN-1326-SM-5GCNT 16.6
GTEX-13NZ9-1026-SM-5MR5K 16.5
GTEX-Y5LM-1726-SM-4VDSX 16.1
GTEX-14E6E-1326-SM-5S2NR 15.8
GTEX-ZTX8-1226-SM-4YCE9 15.8
GTEX-TKQ2-1826-SM-33HB2 15.5
GTEX-13D11-1026-SM-5IJFB 15.2
GTEX-ZYW4-0826-SM-5GIDG 15.2
GTEX-13N1W-0626-SM-5MR4U 15.1
GTEX-UTHO-1026-SM-3GAF7 15.1
GTEX-13OW5-2226-SM-5L3HC 14.8
GTEX-XV7Q-2326-SM-4BRVZ 14.8
GTEX-1399U-1826-SM-5PNZ1 14.7
GTEX-1117F-2826-SM-5GZXL 14.6
GTEX-144GM-0926-SM-5O994 14.4
GTEX-S32W-2026-SM-4AD6E 14.4
GTEX-XYKS-1326-SM-4BRUN 14.4
GTEX-X4EP-2926-SM-3P5YQ 14.3
GTEX-12WSM-1726-SM-5BC6J 14.1
GTEX-13O3P-0826-SM-5L3DH 14.0
GTEX-SE5C-2126-SM-4BRUJ 13.9
GTEX-TKQ1-0226-SM-33HB5 13.8
GTEX-YFCO-1826-SM-4W1YH 13.8
GTEX-13NZ8-0126-SM-5IJCT 13.7
GTEX-R55D-0826-SM-48FEA 13.7
GTEX-SIU7-1626-SM-4BRUK 13.7
GTEX-11EMC-2026-SM-5A5JV 13.6
GTEX-133LE-1726-SM-5K7VQ 13.6
GTEX-13W3W-1226-SM-5LU4H 13.6
GTEX-11LCK-2426-SM-5HL5F 13.5
GTEX-VUSG-2226-SM-4KKZO 13.5
GTEX-XUZC-1626-SM-4BRVP 13.5
GTEX-XGQ4-0926-SM-4AT4U 13.4
GTEX-ZU9S-1926-SM-5NQBP 13.4
GTEX-ZT9W-2026-SM-51MRA 13.3
GTEX-ZYWO-2326-SM-5GZY4 13.3
GTEX-1192X-2326-SM-5987X 13.2
GTEX-132AR-0826-SM-5EGK6 13.2
GTEX-TMMY-0726-SM-33HBE 13.2
GTEX-T5JW-2026-SM-4DM63 12.8
GTEX-ZF29-1926-SM-5S2P1 12.8
GTEX-11I78-2226-SM-5PNYA 12.7
GTEX-12BJ1-1826-SM-5HL9N 12.7
GTEX-S4Q7-1126-SM-4AD6R 12.7
GTEX-11EQ9-1826-SM-5Q5AJ 12.6
GTEX-UPK5-2326-SM-3P5Z8 12.6
GTEX-Y8E4-1626-SM-5S2MW 12.6
GTEX-T2IS-1526-SM-32QPR 12.5
GTEX-Y8LW-1626-SM-5IFHX 12.5
GTEX-ZDTT-2126-SM-5S2OJ 12.5
GTEX-ZV6S-1826-SM-5NQ8D 12.5
GTEX-T6MO-0326-SM-32QOK 12.4
GTEX-UJHI-1426-SM-3DB9C 12.4
GTEX-YEC3-1026-SM-5IFI5 12.4
GTEX-ZVE2-1226-SM-5NQ8R 12.4
GTEX-XUW1-2326-SM-4BOO5 12.3
GTEX-U3ZH-1426-SM-4DXSR 12.2
GTEX-ZQUD-1926-SM-51MSA 12.2
GTEX-ZVT2-1826-SM-5NQ8W 12.2
GTEX-WI4N-1426-SM-3LK7H 12.1
GTEX-ZDYS-1126-SM-5K7UB 12.0
GTEX-11ZTT-2326-SM-5EQLG 11.9
GTEX-14AS3-1626-SM-5S2OY 11.7
GTEX-R55F-1726-SM-2TF4R 11.7
GTEX-XBED-1626-SM-47JYN 11.7
GTEX-WOFL-0826-SM-3MJG1 11.6
GTEX-XUJ4-1926-SM-4BOOV 11.6
GTEX-ZLV1-1426-SM-4WWES 11.6
GTEX-13FTX-1126-SM-5N9EN 11.5
GTEX-145MO-0826-SM-5NQBL 11.5
GTEX-S341-1526-SM-4AD6K 11.5
GTEX-WY7C-2726-SM-3NB3P 11.5
GTEX-Y114-2026-SM-4TT7L 11.5
GTEX-1122O-1226-SM-5H113 11.4
GTEX-S4P3-1326-SM-4AD6V 11.4
GTEX-XQ8I-2426-SM-4WAXY 11.4
GTEX-ZC5H-2626-SM-5J2MG 11.4
GTEX-13113-1726-SM-5GCOO 11.3
GTEX-WYJK-1326-SM-3NB2T 11.3
GTEX-13OW8-0226-SM-5K7UP 11.2
GTEX-146FH-0826-SM-5SI8T 11.2
GTEX-RWS6-1926-SM-47JXY 11.2
GTEX-Y3I4-1526-SM-4TT7K 11.2
GTEX-Y9LG-1426-SM-5IFJZ 11.2
GTEX-13CF2-2026-SM-5K7VI 11.1
GTEX-Q2AG-0326-SM-48U1O 11.1
GTEX-QDT8-0626-SM-48TYW 11.1
GTEX-VJWN-0726-SM-3GIJ8 11.1
GTEX-ZWKS-2826-SM-5NQ74 11.1
GTEX-111YS-1926-SM-5GICC 11.0
GTEX-WXYG-2226-SM-4E3IM 11.0
GTEX-ZF2S-2026-SM-5E461 11.0
GTEX-12ZZX-1126-SM-5EGKB 10.9
GTEX-132Q8-1426-SM-5EGK7 10.9
GTEX-13NZB-2126-SM-5MR4Y 10.9
GTEX-ZZ64-1226-SM-5E43R 10.9
GTEX-13FHO-0826-SM-5L3E8 10.8
GTEX-T6MN-0726-SM-32PML 10.8
GTEX-11EI6-0626-SM-5985T 10.7
GTEX-1269C-2426-SM-5FQSN 10.7
GTEX-13FTY-2226-SM-5J1ND 10.7
GTEX-145LT-0726-SM-5S2VM 10.7
GTEX-U412-1826-SM-4DXTJ 10.7
GTEX-14ABY-2126-SM-5QGQZ 10.6
GTEX-RU72-0626-SM-46MUI 10.6
GTEX-YFC4-1426-SM-5IFJG 10.6
GTEX-11NSD-0926-SM-5N9DR 10.5
GTEX-11P7K-0726-SM-5EGKX 10.5
GTEX-11P81-1926-SM-5BC53 10.5
GTEX-S4UY-0726-SM-4AD6X 10.5
GTEX-TML8-1226-SM-32QON 10.5
GTEX-Y5V5-2126-SM-4WWFO 10.5
GTEX-X15G-1626-SM-3NMB3 10.4
GTEX-XOT4-0726-SM-4GIAW 10.4
GTEX-ZEX8-2226-SM-57WC6 10.3
GTEX-ZPIC-1126-SM-5BC7F 10.3
GTEX-12WSB-0626-SM-59HJO 10.2
GTEX-1313W-0826-SM-5EQ4T 10.2
GTEX-R53T-1526-SM-48FEK 10.2
GTEX-13FTW-1426-SM-5LZWZ 10.1
GTEX-YB5K-1626-SM-5IFIN 10.1
GTEX-ZQG8-0726-SM-5P9H9 10.1
GTEX-117YX-1426-SM-5H12H 10.0
GTEX-11GS4-2126-SM-5A5KR 10.0
GTEX-13N11-1726-SM-5J1OJ 10.0
GTEX-145ME-1526-SM-5Q5F2 10.0
GTEX-11EM3-1326-SM-5N9C6 9.9
GTEX-12KS4-0126-SM-5Q5A5 9.9
GTEX-139T6-1626-SM-5PNYZ 9.9
GTEX-S7SE-0826-SM-4AT4D 9.9
GTEX-XQ3S-1326-SM-4BOPQ 9.9
GTEX-11WQC-1726-SM-5GU4W 9.8
GTEX-13O3Q-2226-SM-5KM4O 9.8
GTEX-145MN-1926-SM-5SIAI 9.8
GTEX-QMRM-1626-SM-4R1KV 9.8
GTEX-Y3IK-2326-SM-4WWDT 9.8
GTEX-PSDG-1626-SM-48TCQ 9.7
GTEX-ZVTK-0326-SM-51MRR 9.7
GTEX-T2YK-2226-SM-32QPT 9.6
GTEX-ZYFC-0826-SM-5E44K 9.6
GTEX-1314G-1226-SM-5BC6D 9.5
GTEX-R3RS-0626-SM-48FE1 9.5
GTEX-11O72-2126-SM-5N9FO 9.4
GTEX-13PL6-2926-SM-5L3I2 9.4
GTEX-U3ZN-1926-SM-4DXSG 9.4
GTEX-ZZPU-0626-SM-5E43T 9.4
GTEX-11NV4-2026-SM-5N9DG 9.3
GTEX-14753-2426-SM-5LU8U 9.3
GTEX-S33H-0326-SM-4AD6N 9.3
GTEX-WYBS-0926-SM-3NM94 9.3
GTEX-ZDXO-0126-SM-5S2ND 9.3
GTEX-ZXES-0826-SM-5E43C 9.3
GTEX-11DXW-0626-SM-5N9ER 9.2
GTEX-11PRG-0826-SM-5EQ6A 9.2
GTEX-WYVS-1726-SM-3NMAY 9.2
GTEX-13QIC-2326-SM-5LU5N 9.0
GTEX-ZYT6-0126-SM-5E45J 9.0
GTEX-12WSK-2226-SM-5GCO5 8.9
GTEX-XMD1-0826-SM-4AT52 8.8
GTEX-Y111-2026-SM-4SOJA 8.8
GTEX-QVJO-1826-SM-447C9 8.7
GTEX-W5X1-2326-SM-3GIL6 8.7
GTEX-ZUA1-1526-SM-59HLS 8.7
GTEX-139TU-0626-SM-5KM3X 8.6
GTEX-144GL-2026-SM-5LU3O 8.5
GTEX-YB5E-1726-SM-5IFJ3 8.5
GTEX-ZVZQ-0826-SM-51MRF 8.5
GTEX-11DXY-2326-SM-5GICW 8.4
GTEX-13W46-0826-SM-5LU3H 8.4
GTEX-WFON-1826-SM-3GILG 8.4
GTEX-11GSO-1926-SM-5A5K3 8.3
GTEX-131YS-0626-SM-5EGKL 8.3
GTEX-147F4-2826-SM-5NQBN 8.3
GTEX-WRHU-0326-SM-3MJFY 8.3
GTEX-11ONC-2126-SM-5HL6E 8.0
GTEX-139T8-0826-SM-5L3DE 8.0
GTEX-T5JC-2126-SM-32PMO 8.0
GTEX-YJ8O-2226-SM-5IFHW 7.9
GTEX-ZVT4-1026-SM-57WC4 7.9
GTEX-11ZUS-0826-SM-5FQUY 7.8
GTEX-ZAB4-2526-SM-5HL8M 7.7
GTEX-11DXZ-1926-SM-5GZZL 7.5
GTEX-11OF3-1926-SM-59889 7.1
GTEX-132NY-0826-SM-5K7Y7 7.0
GTEX-ZF3C-2326-SM-5S2MZ 7.0
GTEX-XMD2-0926-SM-4WWEF 6.9
GTEX-131XW-0726-SM-5EGK3 6.4
GTEX-117XS-1926-SM-5GICO 5.8
GTEX-XMK1-1126-SM-4IHJ8 5.4
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

11.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 11.9
FF:10080-102A8 77 years, female 11.9

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