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ABCF2
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:38.2TPM
GTEx:14.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA020091

 

Antibody HPA021815

 

Antibody HPA030388

 

Antibody CAB020682

 

Endothelial cells

Low   Not detected   Not detected   Not detected  

Glial cells

Medium   Medium   Low   Not detected  

Neuronal cells

Medium   Medium   Medium   Not detected  

Neuropil

Not detected   Low   Not detected   Low  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

38.2

N/A Male, age 5
Sample 1
TPM: 33.2
overview Female, age 40
Sample 2
TPM: 39.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 42.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

14.3

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 14.8
Samples: 114

Max RPKM: 19.5
Min RPKM: 7.2
Std RPKM: 2.7
Median RPKM: 15.4
GTEX-14BMV-3026-SM-5S2PQ 19.5
GTEX-WVLH-3026-SM-3MJG9 19.2
GTEX-RNOR-2326-SM-2TF4I 19.1
GTEX-13FXS-3126-SM-5J2NN 18.9
GTEX-11GSO-2926-SM-5HL73 18.4
GTEX-13NYS-3126-SM-5KLYV 18.4
GTEX-PVOW-2526-SM-2XCF7 18.4
GTEX-QMR6-1426-SM-32PLA 18.4
GTEX-WL46-2926-SM-3LK82 18.0
GTEX-145MF-2726-SM-5O995 17.9
GTEX-T6MN-2626-SM-32PMQ 17.9
GTEX-X4XX-3026-SM-3NMB2 17.8
GTEX-12WSC-3026-SM-5GCNF 17.7
GTEX-145MH-3026-SM-5Q5DZ 17.7
GTEX-14ASI-3026-SM-5S2PN 17.7
GTEX-TSE9-3026-SM-3DB76 17.7
GTEX-13NYC-2826-SM-5K7WR 17.6
GTEX-13SLX-3126-SM-5S2Q5 17.5
GTEX-ZAK1-3026-SM-5S2MJ 17.5
GTEX-117XS-3026-SM-5N9CA 17.4
GTEX-WWYW-3126-SM-3NB39 17.4
GTEX-1313W-3126-SM-5LZUI 17.1
GTEX-13OW6-3026-SM-5J2MI 17.1
GTEX-12ZZY-3026-SM-5GCOU 17.0
GTEX-YFC4-3126-SM-5PNV6 17.0
GTEX-ZYFD-3026-SM-5E44C 17.0
GTEX-12ZZX-2926-SM-5GCOQ 16.8
GTEX-UTHO-3026-SM-3GAFB 16.8
GTEX-13FHO-3026-SM-5J1O9 16.7
GTEX-145LS-3126-SM-5Q5BY 16.7
GTEX-NPJ8-1526-SM-2D7VU 16.7
GTEX-R55F-1326-SM-5S2V4 16.7
GTEX-T2IS-3026-SM-32QPM 16.7
GTEX-WZTO-2926-SM-3NM9I 16.7
GTEX-1192X-3126-SM-5N9BY 16.6
GTEX-Q2AG-2926-SM-2HMJ3 16.6
GTEX-ZUA1-3026-SM-59HJC 16.6
GTEX-13OW8-2826-SM-5L3GC 16.5
GTEX-13VXU-2926-SM-5LU5C 16.5
GTEX-144GL-3026-SM-5Q5CW 16.3
GTEX-QVJO-1426-SM-2S1QY 16.3
GTEX-11DXY-3226-SM-5GIDE 16.2
GTEX-13O3Q-2926-SM-5KM45 16.2
GTEX-X585-3026-SM-46MWF 16.2
GTEX-1128S-2726-SM-5H12C 16.1
GTEX-144FL-3026-SM-5O99C 16.0
GTEX-12126-1026-SM-5P9JJ 15.8
GTEX-13OVH-3026-SM-5MR4N 15.8
GTEX-11NUK-2926-SM-5A5MD 15.7
GTEX-11PRG-2926-SM-5987A 15.7
GTEX-13O3O-3126-SM-5KM3H 15.7
GTEX-YJ89-3026-SM-5IFJI 15.7
GTEX-131YS-3126-SM-5KLYT 15.6
GTEX-QDT8-2926-SM-32PKC 15.6
GTEX-111FC-3126-SM-5GZZ2 15.5
GTEX-11GS4-3126-SM-5A5LH 15.5
GTEX-11ZUS-2926-SM-5FQSL 15.5
GTEX-12ZZZ-3026-SM-5BC67 15.4
GTEX-XOTO-3026-SM-4B65M 15.4
GTEX-145MG-3026-SM-5RQJA 15.3
GTEX-ZVT3-3026-SM-5E43N 15.3
GTEX-11OC5-0726-SM-5P9JK 15.2
GTEX-T5JC-2426-SM-3NMDB 15.2
GTEX-11DXW-1126-SM-5H12Q 15.0
GTEX-11ONC-2926-SM-5P9JM 14.9
GTEX-12WSH-3026-SM-5CVNI 14.8
GTEX-XLM4-3026-SM-4AT6L 14.8
GTEX-ZZPT-3026-SM-5GZXH 14.8
GTEX-13FLW-1426-SM-5K7YE 14.7
GTEX-Z93S-2926-SM-57WB9 14.7
GTEX-13NYB-3026-SM-5IJD7 14.5
GTEX-13FHP-3026-SM-5IJBS 14.4
GTEX-12ZZW-2926-SM-5LZUP 14.3
GTEX-132Q8-3026-SM-5PNVG 14.3
GTEX-WHSE-3026-SM-3P5ZH 14.3
GTEX-ZAJG-3126-SM-5HL9J 14.3
GTEX-14A5I-2926-SM-5Q5CQ 14.2
GTEX-1399T-3026-SM-5KLZC 14.0
GTEX-13QIC-2926-SM-5J2NF 14.0
GTEX-QVUS-2826-SM-3GADB 13.9
GTEX-1117F-3226-SM-5N9CT 13.8
GTEX-Y111-2726-SM-4TT3N 13.8
GTEX-Y8DK-0826-SM-4TT3T 13.7
GTEX-OXRN-2426-SM-2I5EQ 13.6
GTEX-NPJ7-2726-SM-2I3FT 13.2
GTEX-11WQK-3026-SM-5EQL6 13.1
GTEX-13S7M-3126-SM-5RQJQ 13.1
GTEX-RU72-3026-SM-5SI7Y 13.1
GTEX-11OF3-2926-SM-5HL78 13.0
GTEX-13G51-3026-SM-5IJB8 12.8
GTEX-13PL6-3126-SM-5LUAR 12.5
GTEX-11EMC-3226-SM-5EGKW 12.1
GTEX-11O72-2926-SM-5BC4V 11.7
GTEX-13OVJ-2826-SM-5L3GW 11.6
GTEX-13OW7-3026-SM-5L3GY 11.5
GTEX-N7MT-1126-SM-5SI7V 11.5
GTEX-12WSD-3126-SM-5HL7P 11.2
GTEX-13X6J-3026-SM-5Q5CU 11.2
GTEX-11EI6-3026-SM-5GZZO 11.0
GTEX-131XW-3126-SM-5LZUC 10.7
GTEX-13IVO-2926-SM-5L3CZ 10.5
GTEX-13PVQ-3026-SM-5SI93 10.4
GTEX-11TTK-2926-SM-5PNYP 10.1
GTEX-PWO3-0926-SM-2I5EY 10.1
GTEX-13X6K-2926-SM-5Q5D5 10.0
GTEX-ZE7O-3126-SM-5HL5X 10.0
GTEX-13JVG-3126-SM-5L3FH 9.9
GTEX-147GR-3026-SM-5S2ML 9.7
GTEX-1445S-3026-SM-5O9BR 9.6
GTEX-11GSP-3226-SM-5986O 9.3
GTEX-13JUV-2926-SM-5LZX7 9.2
GTEX-139T8-1026-SM-5J2MC 8.1
GTEX-12WSA-2926-SM-5EQ4D 7.6
GTEX-11NV4-2126-SM-5N9DS 7.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 13.8
Samples: 108

Max RPKM: 20.1
Min RPKM: 6.4
Std RPKM: 3.5
Median RPKM: 14.9
GTEX-13N2G-0011-R10a-SM-5MR34 20.1
GTEX-NL3H-0011-R10A-SM-2I3E9 19.4
GTEX-145MG-0011-R10a-SM-5PNWG 19.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 19.0
GTEX-S7SE-0011-R10A-SM-2XCDF 18.9
GTEX-13QJC-0011-R10a-SM-5SI63 18.1
GTEX-13X6K-0011-R10a-SM-5P9JR 18.1
GTEX-WVLH-0011-R10A-SM-3MJFM 18.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 18.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 18.0
GTEX-WL46-0011-R10A-SM-3MJFQ 17.9
GTEX-13S7M-0011-R10b-SM-5PNZB 17.8
GTEX-X4XX-0011-R10B-SM-46MWO 17.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 17.8
GTEX-X585-0011-R10A-SM-46MUY 17.7
GTEX-12WSF-0011-R10a-SM-5LZVH 17.6
GTEX-13NYS-0011-R10a-SM-5MR4S 17.5
GTEX-T6MN-0011-R10A-SM-32QP7 17.5
GTEX-145MH-0011-R10b-SM-5PNUK 17.4
GTEX-ZF28-0011-R10a-SM-4WWEH 17.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 17.2
GTEX-QDT8-0011-R10A-SM-32PKG 17.2
GTEX-1313W-0011-R10b-SM-5DUXA 17.0
GTEX-12WSE-0011-R10b-SM-5P9JV 16.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 16.9
GTEX-WZTO-0011-R10B-SM-4E3KB 16.9
GTEX-YFC4-0011-R10a-SM-4SOK5 16.9
GTEX-131YS-0011-R10b-SM-5EQ5N 16.6
GTEX-13CZV-0011-R10b-SM-5LZYD 16.6
GTEX-13O3Q-0011-R10b-SM-5KM39 16.5
GTEX-12WSM-0011-R10a-SM-5DUWV 16.3
GTEX-XLM4-0011-R10A-SM-4AT5P 16.2
GTEX-13N1W-0011-R10b-SM-5MR4H 16.1
GTEX-14BIL-0011-R10a-SM-5SI75 16.0
GTEX-131XH-0011-R10a-SM-5EGLJ 15.9
GTEX-13OW7-0011-R10a-SM-5L3H3 15.9
GTEX-13QIC-0011-R10a-SM-5O9C7 15.9
GTEX-145LS-0011-R10a-SM-5PNUQ 15.9
GTEX-13SLX-0011-R10a-SM-5P9HV 15.8
GTEX-147GR-0011-R10b-SM-5S2UM 15.8
GTEX-QMR6-0011-R10A-SM-32PKO 15.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 15.6
GTEX-13FHO-0011-R10b-SM-5J2MM 15.6
GTEX-12WSC-0011-R10a-SM-5GU57 15.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 15.5
GTEX-14BIN-0011-R10a-SM-5S2UA 15.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 15.4
GTEX-13O3O-0011-R10a-SM-5LUA9 15.1
GTEX-13X6J-0011-R10b-SM-5PNWA 15.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 15.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 15.0
GTEX-WWYW-0011-R10A-SM-3NB35 15.0
GTEX-13FXS-0011-R10a-SM-5J2MA 14.9
GTEX-QVUS-0011-R10A-SM-3GIK3 14.9
GTEX-11H98-0011-R10b-SM-5NQ98 14.8
GTEX-X4EP-0011-R10B-SM-4QASJ 14.8
GTEX-12WSH-0011-R10a-SM-5LZUS 14.4
GTEX-YJ89-0011-R10a-SM-4SOK9 14.4
GTEX-N7MS-0011-R10A-SM-2HMJK 14.3
GTEX-13OW6-0011-R10a-SM-5L3HE 14.1
GTEX-T5JC-0011-R10A-SM-32PM2 14.1
GTEX-13OVL-0011-R10a-SM-5L3GS 13.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 13.8
GTEX-13FLW-0011-R10b-SM-5LZZF 13.5
GTEX-13X6I-0011-R10a-SM-5PNWI 13.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 13.4
GTEX-N7MT-0011-R10A-SM-2I3E1 12.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 12.8
GTEX-X261-0011-R10B-SM-4E3JT 12.6
GTEX-ZVT3-0011-R10b-SM-57WB6 12.5
GTEX-145LU-0011-R10a-SM-5PNWJ 11.7
GTEX-13OW8-0011-R10a-SM-5L3H6 11.6
GTEX-OXRN-0011-R10A-SM-2I5GC 11.6
GTEX-12126-0011-R10b-SM-5BC6T 11.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 11.3
GTEX-13SLW-0011-R10a-SM-5S2UI 11.3
GTEX-147F4-0011-R10b-SM-5S2WC 11.3
GTEX-13NYB-0011-R10a-SM-5KM43 11.2
GTEX-Z93S-0011-R10a-SM-4RGNM 11.1
GTEX-P44H-0011-R10A-SM-2XCEK 11.0
GTEX-TSE9-0011-R10A-SM-3DB7O 11.0
GTEX-ZUA1-0011-R10a-SM-51MT6 10.9
GTEX-NL4W-0011-R10A-SM-2I3DY 10.8
GTEX-RVPU-0011-R10A-SM-2XCAH 10.8
GTEX-13G51-0011-R10b-SM-5LZYF 10.7
GTEX-11WQC-0011-R10a-SM-57WCT 10.6
GTEX-12WSD-0011-R10b-SM-5GU79 10.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 10.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 10.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 9.5
GTEX-13JUV-0011-R10b-SM-5LZXR 9.5
GTEX-11WQK-0011-R10a-SM-5BC6R 9.2
GTEX-1445S-0011-R10a-SM-5PNWB 9.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 8.8
GTEX-11ZUS-0011-R10b-SM-5BC79 8.6
GTEX-ZXG5-0011-R10a-SM-57WDD 8.4
GTEX-12WSA-0011-R10b-SM-5P9ET 8.0
GTEX-139TS-0011-R10a-SM-5K7TU 8.0
GTEX-13NZA-0011-R10b-SM-5KM54 7.9
GTEX-1477Z-0011-R10b-SM-5S2RF 7.9
GTEX-13IVO-0011-R10a-SM-5LZY3 7.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.8
GTEX-14753-0011-R10b-SM-5S2WE 7.4
GTEX-ZV68-0011-R10a-SM-51MT7 7.4
GTEX-OXRO-0011-R10A-SM-2I5EH 7.3
GTEX-XMD1-0011-R10A-SM-4AT4A 7.1
GTEX-131XW-0011-R10a-SM-5DUVA 6.8
GTEX-13JVG-0011-R10b-SM-5KM2P 6.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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