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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:20.2TPM
GTEx:10.5RPKM
FANTOM5:22.7Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:Not detected
 

Antibody staining

Antibody HPA020091

 

Antibody HPA021815

 

Antibody HPA030388

 

Antibody CAB020682

 

Cells in glomeruli

Low   Not detected   Not detected   Not detected  

Cells in tubules

Medium   Medium   Not detected   High  
       
       
       

KIDNEY - HPA RNA-seq

Average TPM

20.2

overview Female, age 58
Sample 1
TPM: 24.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 17.8
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 19.5
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 16.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 12.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 24.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 16.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 29.7
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 22.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 10.5
Samples: 32

Max RPKM: 17.1
Min RPKM: 5.3
Std RPKM: 3.1
Median RPKM: 10.5
GTEX-QLQW-1626-SM-4R1K1 17.1
GTEX-ZYFG-1626-SM-5GZYY 16.5
GTEX-12696-0926-SM-5FQTV 16.4
GTEX-ZVZP-0926-SM-5GIDB 13.6
GTEX-145MN-0326-SM-5QGQI 13.2
GTEX-12WSG-0826-SM-5EQ5A 13.0
GTEX-1399S-0526-SM-5IJG8 13.0
GTEX-ZLFU-0926-SM-5P9F8 12.7
GTEX-RN64-1626-SM-48FD7 12.7
GTEX-XPVG-0526-SM-4B65N 12.1
GTEX-1497J-0826-SM-5NQAJ 12.1
GTEX-147F4-2626-SM-5Q5CS 11.5
GTEX-13RTJ-2226-SM-5S2Q1 10.9
GTEX-13O1R-2526-SM-5N9FW 10.8
GTEX-P4QS-1126-SM-3NMD5 10.8
GTEX-ZYFD-1526-SM-5NQ7T 10.7
GTEX-11TTK-1926-SM-5PNW8 10.3
GTEX-QDVN-1626-SM-48TZC 10.2
GTEX-UPIC-1126-SM-4IHLO 10.1
GTEX-ZYT6-2226-SM-5GIC9 10.1
GTEX-13112-2126-SM-5GCO4 9.6
GTEX-13OVI-1126-SM-5KLZF 8.8
GTEX-11GS4-2326-SM-5A5KS 8.4
GTEX-13NYB-1726-SM-5N9G2 8.4
GTEX-Y5V6-2026-SM-5IFHO 8.4
GTEX-N7MS-1626-SM-3LK5F 8.0
GTEX-ZC5H-1726-SM-5HL7X 7.9
GTEX-13OVL-1826-SM-5KLZR 6.5
GTEX-T5JC-1526-SM-4DM68 5.8
GTEX-11OF3-1326-SM-5N9FJ 5.6
GTEX-NPJ8-2226-SM-3TW8D 5.3
GTEX-13OW6-1826-SM-5N9F9 5.3
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

22.7

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 22.7
FF:10017-101C8 60,62,63 years, female 22.7

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