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SYNE2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.2TPM
GTEx:9.2RPKM
FANTOM5:143.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not available
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA003435

  

Antibody HPA050204

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected  

Chondrocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA003435

  

Antibody HPA050204

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

15.2
N/A Female, age 80
Sample 1
TPM: 21.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 16.1
N/A Female, age 57
Sample 3
TPM: 14.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 13.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 10.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.1
Samples: 350

Max RPKM: 22.4
Min RPKM: 3.2
Std RPKM: 3.2
Median RPKM: 9.7
GTEX-PWCY-1926-SM-3NB25 22.4
GTEX-NFK9-0326-SM-3MJGV 21.0
GTEX-RTLS-0226-SM-2TF5E 19.4
GTEX-14BMU-2126-SM-5S2TS 19.3
GTEX-P4QS-0226-SM-3NB1U 18.7
GTEX-OIZH-0226-SM-2YUMH 17.6
GTEX-1122O-2026-SM-5NQ91 17.5
GTEX-13O61-2426-SM-5J1NV 17.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.8
Samples: 227

Max RPKM: 17.7
Min RPKM: 1.3
Std RPKM: 2.5
Median RPKM: 7.4
GTEX-X585-2526-SM-4QAS1 17.7
GTEX-13JUV-0626-SM-5J1MQ 17.5
GTEX-1192X-1526-SM-5H11I 16.0
GTEX-13NYS-0726-SM-5J1OR 15.9
GTEX-132Q8-1726-SM-5EGK8 14.0
GTEX-14ICL-0926-SM-5S2TU 13.9
GTEX-12ZZW-2326-SM-5DUW2 13.1
GTEX-12ZZX-1726-SM-5BC63 12.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

143.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 143.4
FF:10010-101C1 65,65,76 years, mixed 143.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.