Tissue expression of SYNE2 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	23.1	TPM
GTEx:	10.5	RPKM
FANTOM5:	113.6	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	Low
Myoepithelial cells:	Not detected

Antibody staining	Antibody HPA003435	Antibody HPA050204
Adipocytes	Not detected	Not detected
Glandular cells	Medium	Low
Myoepithelial cells	Medium	Not detected

BREAST - HPA RNA-seq

Average TPM	23.1

Female, age 52

Sample 1
TPM: 15.5

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 28.8

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 26.2

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 22.2

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	10.5

GTEx sample id

RPKM

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 10.5

Samples: 214

Max RPKM: 25.1
Min RPKM: 2.4
Std RPKM: 3.1
Median RPKM: 10.3

GTEX-132Q8-1426-SM-5EGK7

25.1

GTEX-T2YK-2226-SM-32QPT

21.0

GTEX-ZVE2-1226-SM-5NQ8R

19.6

GTEX-13OW5-2226-SM-5L3HC

17.8

GTEX-111YS-1926-SM-5GICC

17.2

GTEX-ZWKS-2826-SM-5NQ74

16.7

GTEX-ZF3C-2326-SM-5S2MZ

16.5

GTEX-XUZC-1626-SM-4BRVP

16.0

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	113.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 113.6

FF:10080-102A8

77 years, female

113.6