Tissue expression of SYNE2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	18.0	TPM
GTEx:	8.3	RPKM
FANTOM5:	80.9	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA003435	Antibody HPA050204
Squamous epithelial cells	Medium	High

ESOPHAGUS - HPA RNA-seq

Average TPM	18.0

Female, age 70

Sample 1
TPM: 18.8

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 16.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 18.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	8.3

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 8.3

Samples: 286

Max RPKM: 17.7
Min RPKM: 2.7
Std RPKM: 2.1
Median RPKM: 8.5

GTEX-ZZPT-1426-SM-5N9C5

17.7

GTEX-ZF3C-1626-SM-4WWB4

16.1

GTEX-11XUK-0826-SM-5GU6P

13.0

GTEX-12WSA-1426-SM-5EGJU

13.0

GTEX-1399U-1026-SM-5J1OC

13.0

GTEX-ZPCL-1426-SM-57WEC

12.6

GTEX-ZYT6-1126-SM-5GZYR

12.6

GTEX-13FHO-1726-SM-5IFGM

12.4

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	80.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 80.9

FF:10015-101C6

68,74,75 years, mixed

80.9