Tissue expression of SYNE2 - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	86.2	TPM
GTEx:	12.4	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	High
Langerhans:	High
Melanocytes:	Medium

Antibody staining	Antibody HPA003435	Antibody HPA050204
Fibroblasts	Low	Not detected
Keratinocytes	High	High
Langerhans	High	High
Melanocytes	High	Medium

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	High

Antibody staining	Antibody HPA003435	Antibody HPA050204
Epidermal cells	Medium	High

SKIN - HPA RNA-seq

Average TPM	86.2

Female, age 34

Sample 1
TPM: 74.3

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 92.5

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 91.7

SKIN - GTEx RNA-seq

Average RPKM	12.4

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 13.8

Samples: 250

Max RPKM: 30.7
Min RPKM: 5
Std RPKM: 3.7
Median RPKM: 13.5

GTEX-ZVT2-0126-SM-5GIDQ

30.7

GTEX-1399U-1126-SM-5L3DB

27.0

GTEX-14C39-1726-SM-5RQIL

26.1

GTEX-13X6H-0926-SM-5SIB2

25.9

GTEX-131XF-2626-SM-5EQ6K

25.0

GTEX-ZAB4-2126-SM-5HL8U

22.7

GTEX-ZA64-1026-SM-5HL8R

22.1

GTEX-Y111-0626-SM-4SOIT

21.8

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Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 11.4

Samples: 357

Max RPKM: 31.5
Min RPKM: 2.7
Std RPKM: 3.5
Median RPKM: 10.8

GTEX-12WSK-2326-SM-5GCOH

31.5

GTEX-WFG8-2226-SM-3GIL9

28.9

GTEX-T6MO-1626-SM-32QOM

22.0

GTEX-P44H-0226-SM-2XCEU

21.6

GTEX-OHPM-0126-SM-2YUN9

20.9

GTEX-ZXG5-0126-SM-5GIEU

20.9

GTEX-YF7O-2326-101833-SM-5CVN9

20.8

GTEX-ZY6K-1826-SM-5GZXK

20.2

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SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue