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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:141.9TPM
GTEx:59.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Low
 

Antibody staining

Antibody HPA016936

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Low  

Neuropil

Low  
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

141.9

N/A Male, age 5
Sample 1
TPM: 146.1
overview Female, age 40
Sample 2
TPM: 80.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 198.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

59.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 52.9
Samples: 114

Max RPKM: 76.1
Min RPKM: 21.5
Std RPKM: 12.3
Median RPKM: 55
GTEX-WVLH-3026-SM-3MJG9 76.1
GTEX-11DXY-3226-SM-5GIDE 75.0
GTEX-X585-3026-SM-46MWF 74.3
GTEX-14BMV-3026-SM-5S2PQ 73.0
GTEX-13NYC-2826-SM-5K7WR 71.8
GTEX-T5JC-2426-SM-3NMDB 71.4
GTEX-PVOW-2526-SM-2XCF7 70.9
GTEX-13FLW-1426-SM-5K7YE 69.5
GTEX-145MH-3026-SM-5Q5DZ 68.9
GTEX-UTHO-3026-SM-3GAFB 68.7
GTEX-WL46-2926-SM-3LK82 68.6
GTEX-Z93S-2926-SM-57WB9 67.9
GTEX-XLM4-3026-SM-4AT6L 67.2
GTEX-QVJO-1426-SM-2S1QY 66.5
GTEX-WZTO-2926-SM-3NM9I 66.4
GTEX-T2IS-3026-SM-32QPM 65.7
GTEX-T6MN-2626-SM-32PMQ 65.6
GTEX-145LS-3126-SM-5Q5BY 65.3
GTEX-ZAK1-3026-SM-5S2MJ 64.9
GTEX-131YS-3126-SM-5KLYT 64.6
GTEX-QMR6-1426-SM-32PLA 64.3
GTEX-1313W-3126-SM-5LZUI 64.1
GTEX-13NYS-3126-SM-5KLYV 63.9
GTEX-WHSE-3026-SM-3P5ZH 63.9
GTEX-WWYW-3126-SM-3NB39 63.9
GTEX-X4XX-3026-SM-3NMB2 63.9
GTEX-13FXS-3126-SM-5J2NN 63.2
GTEX-YFC4-3126-SM-5PNV6 62.5
GTEX-12WSC-3026-SM-5GCNF 62.2
GTEX-11ZUS-2926-SM-5FQSL 62.0
GTEX-13FHO-3026-SM-5J1O9 61.7
GTEX-117XS-3026-SM-5N9CA 61.1
GTEX-13SLX-3126-SM-5S2Q5 61.1
GTEX-13OVH-3026-SM-5MR4N 61.0
GTEX-12ZZX-2926-SM-5GCOQ 60.8
GTEX-11NUK-2926-SM-5A5MD 60.6
GTEX-ZYFD-3026-SM-5E44C 60.1
GTEX-11PRG-2926-SM-5987A 59.8
GTEX-13O3Q-2926-SM-5KM45 59.8
GTEX-1192X-3126-SM-5N9BY 59.6
GTEX-13VXU-2926-SM-5LU5C 59.3
GTEX-12ZZY-3026-SM-5GCOU 59.1
GTEX-Y8DK-0826-SM-4TT3T 59.1
GTEX-ZUA1-3026-SM-59HJC 59.1
GTEX-14ASI-3026-SM-5S2PN 58.4
GTEX-132Q8-3026-SM-5PNVG 58.3
GTEX-145MG-3026-SM-5RQJA 58.1
GTEX-QDT8-2926-SM-32PKC 57.9
GTEX-11DXW-1126-SM-5H12Q 56.6
GTEX-NPJ8-1526-SM-2D7VU 56.0
GTEX-TSE9-3026-SM-3DB76 56.0
GTEX-R55F-1326-SM-5S2V4 55.4
GTEX-13NYB-3026-SM-5IJD7 55.3
GTEX-YJ89-3026-SM-5IFJI 55.3
GTEX-11GSO-2926-SM-5HL73 55.2
GTEX-XOTO-3026-SM-4B65M 55.1
GTEX-111FC-3126-SM-5GZZ2 55.0
GTEX-13O3O-3126-SM-5KM3H 55.0
GTEX-13OW6-3026-SM-5J2MI 55.0
GTEX-1399T-3026-SM-5KLZC 54.7
GTEX-12126-1026-SM-5P9JJ 54.3
GTEX-RNOR-2326-SM-2TF4I 54.1
GTEX-13OW8-2826-SM-5L3GC 53.8
GTEX-11OF3-2926-SM-5HL78 52.8
GTEX-144GL-3026-SM-5Q5CW 52.4
GTEX-QVUS-2826-SM-3GADB 52.4
GTEX-13X6J-3026-SM-5Q5CU 51.9
GTEX-ZVT3-3026-SM-5E43N 50.9
GTEX-Q2AG-2926-SM-2HMJ3 50.5
GTEX-12ZZW-2926-SM-5LZUP 50.2
GTEX-11OC5-0726-SM-5P9JK 50.0
GTEX-13FHP-3026-SM-5IJBS 49.8
GTEX-1128S-2726-SM-5H12C 49.5
GTEX-12ZZZ-3026-SM-5BC67 49.5
GTEX-11ONC-2926-SM-5P9JM 48.6
GTEX-Y111-2726-SM-4TT3N 48.4
GTEX-RU72-3026-SM-5SI7Y 48.3
GTEX-ZE7O-3126-SM-5HL5X 48.1
GTEX-12WSH-3026-SM-5CVNI 47.6
GTEX-145MF-2726-SM-5O995 47.0
GTEX-ZZPT-3026-SM-5GZXH 46.8
GTEX-14A5I-2926-SM-5Q5CQ 46.1
GTEX-11GS4-3126-SM-5A5LH 45.7
GTEX-13X6K-2926-SM-5Q5D5 44.5
GTEX-NPJ7-2726-SM-2I3FT 44.2
GTEX-13G51-3026-SM-5IJB8 43.7
GTEX-13PL6-3126-SM-5LUAR 43.5
GTEX-13QIC-2926-SM-5J2NF 43.0
GTEX-11WQK-3026-SM-5EQL6 42.7
GTEX-OXRN-2426-SM-2I5EQ 41.9
GTEX-ZAJG-3126-SM-5HL9J 41.8
GTEX-11EI6-3026-SM-5GZZO 41.3
GTEX-13PVQ-3026-SM-5SI93 40.6
GTEX-13OVJ-2826-SM-5L3GW 39.9
GTEX-139T8-1026-SM-5J2MC 39.7
GTEX-144FL-3026-SM-5O99C 39.6
GTEX-11NV4-2126-SM-5N9DS 39.4
GTEX-13S7M-3126-SM-5RQJQ 39.4
GTEX-13JUV-2926-SM-5LZX7 37.3
GTEX-N7MT-1126-SM-5SI7V 37.3
GTEX-1117F-3226-SM-5N9CT 36.0
GTEX-11EMC-3226-SM-5EGKW 35.3
GTEX-131XW-3126-SM-5LZUC 34.8
GTEX-12WSD-3126-SM-5HL7P 34.6
GTEX-11TTK-2926-SM-5PNYP 33.2
GTEX-13JVG-3126-SM-5L3FH 31.9
GTEX-11O72-2926-SM-5BC4V 31.8
GTEX-PWO3-0926-SM-2I5EY 31.8
GTEX-13OW7-3026-SM-5L3GY 30.9
GTEX-11GSP-3226-SM-5986O 28.5
GTEX-147GR-3026-SM-5S2ML 27.4
GTEX-12WSA-2926-SM-5EQ4D 26.1
GTEX-13IVO-2926-SM-5L3CZ 25.3
GTEX-1445S-3026-SM-5O9BR 21.5
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 67.0
Samples: 108

Max RPKM: 106
Min RPKM: 19.1
Std RPKM: 20.8
Median RPKM: 71.7
GTEX-13NYS-0011-R10a-SM-5MR4S 106.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 104.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 101.4
GTEX-13SLX-0011-R10a-SM-5P9HV 100.4
GTEX-X585-0011-R10A-SM-46MUY 97.9
GTEX-12WSC-0011-R10a-SM-5GU57 97.0
GTEX-13O3Q-0011-R10b-SM-5KM39 95.4
GTEX-T6MN-0011-R10A-SM-32QP7 92.1
GTEX-14BIN-0011-R10a-SM-5S2UA 91.0
GTEX-145MG-0011-R10a-SM-5PNWG 90.9
GTEX-131XH-0011-R10a-SM-5EGLJ 90.7
GTEX-1313W-0011-R10b-SM-5DUXA 88.7
GTEX-13X6K-0011-R10a-SM-5P9JR 88.7
GTEX-145MH-0011-R10b-SM-5PNUK 86.9
GTEX-13NYB-0011-R10a-SM-5KM43 86.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 86.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 86.5
GTEX-NL3H-0011-R10A-SM-2I3E9 86.4
GTEX-13X6J-0011-R10b-SM-5PNWA 85.8
GTEX-12WSE-0011-R10b-SM-5P9JV 85.5
GTEX-12WSF-0011-R10a-SM-5LZVH 85.3
GTEX-13N1W-0011-R10b-SM-5MR4H 84.3
GTEX-QMR6-0011-R10A-SM-32PKO 84.3
GTEX-WL46-0011-R10A-SM-3MJFQ 83.6
GTEX-WVLH-0011-R10A-SM-3MJFM 83.6
GTEX-T5JC-0011-R10A-SM-32PM2 83.0
GTEX-WWYW-0011-R10A-SM-3NB35 83.0
GTEX-P44H-0011-R10A-SM-2XCEK 82.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 81.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 81.0
GTEX-13CZV-0011-R10b-SM-5LZYD 80.6
GTEX-13OW7-0011-R10a-SM-5L3H3 80.4
GTEX-XLM4-0011-R10A-SM-4AT5P 80.1
GTEX-11H98-0011-R10b-SM-5NQ98 79.9
GTEX-131YS-0011-R10b-SM-5EQ5N 79.6
GTEX-13O3O-0011-R10a-SM-5LUA9 79.5
GTEX-Z93S-0011-R10a-SM-4RGNM 79.1
GTEX-YFC4-0011-R10a-SM-4SOK5 78.8
GTEX-13FHO-0011-R10b-SM-5J2MM 78.6
GTEX-WZTO-0011-R10B-SM-4E3KB 78.1
GTEX-13QIC-0011-R10a-SM-5O9C7 76.4
GTEX-N7MS-0011-R10A-SM-2HMJK 76.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 75.7
GTEX-147GR-0011-R10b-SM-5S2UM 75.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 75.3
GTEX-13FLW-0011-R10b-SM-5LZZF 75.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 74.6
GTEX-S7SE-0011-R10A-SM-2XCDF 74.5
GTEX-X4EP-0011-R10B-SM-4QASJ 74.0
GTEX-X4XX-0011-R10B-SM-46MWO 73.2
GTEX-13FXS-0011-R10a-SM-5J2MA 72.7
GTEX-QDT8-0011-R10A-SM-32PKG 72.5
GTEX-YJ89-0011-R10a-SM-4SOK9 72.2
GTEX-13S7M-0011-R10b-SM-5PNZB 71.9
GTEX-13X6I-0011-R10a-SM-5PNWI 71.5
GTEX-ZF28-0011-R10a-SM-4WWEH 71.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 70.9
GTEX-13QJC-0011-R10a-SM-5SI63 70.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 70.0
GTEX-14BIL-0011-R10a-SM-5SI75 69.7
GTEX-12WSM-0011-R10a-SM-5DUWV 69.6
GTEX-145LS-0011-R10a-SM-5PNUQ 69.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 69.2
GTEX-QVUS-0011-R10A-SM-3GIK3 68.8
GTEX-13N2G-0011-R10a-SM-5MR34 67.9
GTEX-12WSH-0011-R10a-SM-5LZUS 67.5
GTEX-ZUA1-0011-R10a-SM-51MT6 66.3
GTEX-N7MT-0011-R10A-SM-2I3E1 65.2
GTEX-13OVL-0011-R10a-SM-5L3GS 65.1
GTEX-13OW6-0011-R10a-SM-5L3HE 64.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 63.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 60.7
GTEX-TSE9-0011-R10A-SM-3DB7O 59.0
GTEX-ZVT3-0011-R10b-SM-57WB6 58.6
GTEX-13G51-0011-R10b-SM-5LZYF 57.7
GTEX-12WSD-0011-R10b-SM-5GU79 57.5
GTEX-147F4-0011-R10b-SM-5S2WC 56.1
GTEX-13JUV-0011-R10b-SM-5LZXR 55.5
GTEX-13OW8-0011-R10a-SM-5L3H6 55.0
GTEX-RVPU-0011-R10A-SM-2XCAH 54.7
GTEX-12126-0011-R10b-SM-5BC6T 52.3
GTEX-OXRN-0011-R10A-SM-2I5GC 51.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 51.0
GTEX-145LU-0011-R10a-SM-5PNWJ 48.4
GTEX-11ZUS-0011-R10b-SM-5BC79 47.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 47.4
GTEX-13SLW-0011-R10a-SM-5S2UI 46.5
GTEX-11WQK-0011-R10a-SM-5BC6R 46.1
GTEX-139TS-0011-R10a-SM-5K7TU 41.5
GTEX-X261-0011-R10B-SM-4E3JT 41.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 40.6
GTEX-ZXG5-0011-R10a-SM-57WDD 39.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 39.1
GTEX-NL4W-0011-R10A-SM-2I3DY 38.9
GTEX-ZE7O-0011-R10a-SM-57WAZ 38.2
GTEX-12WSA-0011-R10b-SM-5P9ET 37.2
GTEX-XMD1-0011-R10A-SM-4AT4A 36.8
GTEX-11WQC-0011-R10a-SM-57WCT 36.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 35.4
GTEX-13NZA-0011-R10b-SM-5KM54 32.2
GTEX-OXRO-0011-R10A-SM-2I5EH 30.5
GTEX-13JVG-0011-R10b-SM-5KM2P 30.2
GTEX-1445S-0011-R10a-SM-5PNWB 26.3
GTEX-1477Z-0011-R10b-SM-5S2RF 25.2
GTEX-14753-0011-R10b-SM-5S2WE 24.4
GTEX-ZV68-0011-R10a-SM-51MT7 22.8
GTEX-13IVO-0011-R10a-SM-5LZY3 21.1
GTEX-131XW-0011-R10a-SM-5DUVA 19.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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