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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.8TPM
GTEx:19.0RPKM
FANTOM5:33.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA016936

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

31.8

overview Male, age 65
Sample 1
TPM: 31.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 31.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 34.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 29.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

19.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 19.0
Samples: 88

Max RPKM: 27.6
Min RPKM: 13
Std RPKM: 3.3
Median RPKM: 18.9
GTEX-VUSG-1726-SM-4KKZL 27.6
GTEX-11NSD-1726-SM-5N9C3 26.6
GTEX-117YX-0326-SM-5GICL 25.7
GTEX-131XG-1726-SM-5LZUR 25.3
GTEX-13O61-1326-SM-5KM31 25.2
GTEX-UPK5-2026-SM-4JBIM 24.2
GTEX-ZF2S-1726-SM-57WFT 24.1
GTEX-ZQUD-0926-SM-57WE3 23.3
GTEX-11VI4-1626-SM-5EQKO 23.3
GTEX-WFJO-0926-SM-4LVM2 23.0
GTEX-148VJ-2226-SM-5NQ9M 22.9
GTEX-12BJ1-1926-SM-5HL9Z 22.5
GTEX-ZLFU-1526-SM-4WWBT 22.5
GTEX-Y5LM-1626-SM-4VDTB 22.4
GTEX-11P82-0826-SM-5P9GU 22.1
GTEX-WRHK-1026-SM-4MVOD 22.1
GTEX-WH7G-1626-SM-4LVMY 21.9
GTEX-ZC5H-2326-SM-4WAYT 21.9
GTEX-X15G-1426-SM-4PQZK 21.7
GTEX-ZEX8-1826-SM-57WBH 21.6
GTEX-13FH7-1226-SM-5IJFK 21.5
GTEX-145ME-0926-SM-5O9AR 21.4
GTEX-Y3IK-1726-SM-4YCCR 21.4
GTEX-11XUK-1426-SM-5EQMG 21.2
GTEX-111CU-1326-SM-5NQ8L 20.8
GTEX-1399U-2126-SM-5IFEZ 20.8
GTEX-WFG8-1626-SM-4LVMB 20.8
GTEX-XGQ4-1326-SM-4GIDU 20.8
GTEX-ZP4G-1626-SM-57WGD 20.7
GTEX-WEY5-1526-SM-4LMJF 20.7
GTEX-1192X-2526-SM-59868 20.6
GTEX-13QBU-1926-SM-5IJEW 20.4
GTEX-Z9EW-0926-SM-5CVMM 20.3
GTEX-ZYWO-1526-SM-5SIAL 20.1
GTEX-133LE-1426-SM-5IFH1 20.1
GTEX-13111-1426-SM-5DUW3 20.0
GTEX-1399R-2026-SM-5K7WN 20.0
GTEX-13RTK-0826-SM-5Q5C6 19.9
GTEX-1399S-2026-SM-5KM4B 19.8
GTEX-139YR-2226-SM-5IFFW 19.7
GTEX-11DXZ-1326-SM-5H11X 19.3
GTEX-XAJ8-0526-SM-47JYK 19.1
GTEX-14E6E-1626-SM-5RQI7 19.1
GTEX-12WSK-1526-SM-5CVNO 19.0
GTEX-XMK1-1826-SM-4B66F 18.8
GTEX-ZTPG-2626-SM-57WFX 18.7
GTEX-ZQG8-2526-SM-57WEQ 18.6
GTEX-11I78-1126-SM-5A5K5 18.6
GTEX-ZVT2-2126-SM-5NQ93 18.6
GTEX-11DXX-1626-SM-5H11H 18.6
GTEX-ZVP2-1726-SM-5GU5P 18.5
GTEX-131XF-1326-SM-5GCMQ 18.4
GTEX-ZZ64-0526-SM-5GZXM 18.3
GTEX-11EQ9-1326-SM-5985X 18.2
GTEX-ZA64-1226-SM-5HL7B 17.9
GTEX-139T6-1026-SM-5IJGC 17.7
GTEX-VJYA-0926-SM-4KL1N 17.5
GTEX-ZTSS-0926-SM-59865 17.3
GTEX-ZPIC-2326-SM-57WDW 17.3
GTEX-XXEK-1026-SM-4BRUW 17.1
GTEX-13OVI-1926-SM-5IJCG 17.1
GTEX-13113-1226-SM-5EGHT 17.0
GTEX-ZYFG-2026-SM-5E43Y 16.6
GTEX-WFG7-1726-SM-4LVME 16.5
GTEX-13D11-0726-SM-5LZZB 16.4
GTEX-14DAR-1426-SM-5RQIR 16.3
GTEX-XUZC-1426-SM-4BRV3 16.3
GTEX-145LT-1026-SM-5LU9O 16.1
GTEX-X5EB-1626-SM-4E3IV 16.1
GTEX-13O21-1026-SM-5IJDU 16.1
GTEX-YF7O-1826-SM-5IFIU 16.0
GTEX-Y114-1426-SM-4TT6W 15.8
GTEX-1122O-1326-SM-5H11F 14.8
GTEX-ZXES-1526-SM-5NQ95 14.7
GTEX-11P7K-1626-SM-5GU63 14.7
GTEX-ZPCL-1726-SM-57WEO 14.6
GTEX-13CF3-1226-SM-5LZXN 14.6
GTEX-Y9LG-1626-SM-5IFHM 14.6
GTEX-ZLV1-1126-SM-4WWBW 14.5
GTEX-WQUQ-2426-SM-4MVNW 14.5
GTEX-13PL7-2626-SM-5IFH4 14.5
GTEX-ZVZP-1826-SM-5GZXB 14.5
GTEX-YB5E-1526-SM-5IFIE 14.0
GTEX-13FTW-2026-SM-5IJE2 14.0
GTEX-ZTX8-0526-SM-59HLD 13.9
GTEX-XBED-1426-SM-4AT4G 13.4
GTEX-YEC4-1726-SM-4W21E 13.1
GTEX-111YS-1426-SM-5GID8 13.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

33.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 33.3
FF:10024-101D6 15,40,85 years, mixed 33.3

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