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HAGH

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:44.1TPM
GTEx:11.3RPKM
FANTOM5:14.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not detected
 

Antibody staining

Antibody HPA043041

  

Antibody HPA061143

  

Chondrocytes

 Low   Not detected  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Low   Not detected  

Adipocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA043041

  

Antibody HPA061143

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

44.1
N/A Female, age 80
Sample 1
TPM: 54.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 46.4
N/A Female, age 57
Sample 3
TPM: 47.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 31.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 39.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.1
Samples: 350

Max RPKM: 30
Min RPKM: 3.9
Std RPKM: 3.3
Median RPKM: 10.5
GTEX-Y5V6-2526-SM-5IFJV 30.0
GTEX-1399U-2426-SM-5K7XB 26.6
GTEX-ZVT2-2226-SM-5NQ6P 21.9
GTEX-ZP4G-2326-SM-57WEM 20.4
GTEX-PWN1-0226-SM-5SI7O 19.9
GTEX-SUCS-1826-SM-32PM1 19.4
GTEX-147F3-0626-SM-5NQ9I 19.3
GTEX-11DXX-2326-SM-5Q5A2 18.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.8
Samples: 227

Max RPKM: 20
Min RPKM: 4.3
Std RPKM: 3.3
Median RPKM: 11.6
GTEX-13IVO-2426-SM-5K7V9 20.0
GTEX-1122O-0926-SM-5N9C9 19.8
GTEX-ZF2S-1526-SM-5S2OO 19.4
GTEX-XAJ8-0226-SM-4GIB2 19.3
GTEX-12ZZX-1726-SM-5BC63 19.1
GTEX-131XG-0126-SM-5K7UJ 18.9
GTEX-139D8-1626-SM-5IJFZ 18.4
GTEX-ZYFC-1826-SM-5GZZA 18.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

14.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 14.5
FF:10010-101C1 65,65,76 years, mixed 14.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.