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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.2TPM
GTEx:13.7RPKM
FANTOM5:8.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA052262

 

Glandular cells

Low  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

18.2

overview Male, age 62
Sample 1
TPM: 7.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 14.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 24.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 48.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 7.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 22.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 11.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 27.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 6.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

13.7

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 13.7
Samples: 106

Max RPKM: 64.1
Min RPKM: 0.3
Std RPKM: 10.6
Median RPKM: 11.2
GTEX-S4Q7-1026-SM-4AD75 64.1
GTEX-RWSA-2026-SM-47JX8 44.7
GTEX-PLZ6-1126-SM-3P5ZR 41.3
GTEX-SNMC-0926-SM-4DM5U 41.1
GTEX-Q2AI-1126-SM-48U19 32.9
GTEX-ZZ64-0926-SM-5E44L 31.8
GTEX-U3ZM-0926-SM-4DXSW 31.3
GTEX-U4B1-1426-SM-4DXTX 31.0
GTEX-YB5E-1826-SM-5IFI4 31.0
GTEX-WOFM-0326-SM-4OOSL 30.9
GTEX-ZUA1-2826-SM-59HLE 27.6
GTEX-1399R-0526-SM-5IJEF 26.9
GTEX-145LT-0626-SM-5O99E 24.8
GTEX-SJXC-2026-SM-4DM6N 24.2
GTEX-Y9LG-1826-SM-4VBQC 23.3
GTEX-V1D1-1926-SM-4JBGX 23.0
GTEX-146FQ-1726-SM-5QGPX 22.4
GTEX-132NY-2826-SM-5P9G2 22.2
GTEX-XQ3S-2526-SM-4BOOG 20.8
GTEX-XMK1-1026-SM-4B65H 20.6
GTEX-13FHO-2826-SM-5K7ZA 20.0
GTEX-13FTW-1226-SM-5LZZ1 19.5
GTEX-Y8E4-2126-SM-5RQHO 19.5
GTEX-11ZUS-2126-SM-5N9E6 19.3
GTEX-YF7O-1926-SM-4W1YQ 19.2
GTEX-WFG8-1826-SM-4LVM4 19.0
GTEX-WFON-1626-SM-4LVMV 18.9
GTEX-111FC-2026-SM-5GZYO 18.2
GTEX-QV31-1026-SM-4R1K3 18.0
GTEX-11P82-1126-SM-5BC5K 17.8
GTEX-SNOS-1026-SM-4DM4Y 17.7
GTEX-ZY6K-1526-SM-5GZXE 17.4
GTEX-145LV-1226-SM-5S2QH 16.7
GTEX-11WQK-2726-SM-5EQMU 16.6
GTEX-S33H-1826-SM-4AD65 16.4
GTEX-X5EB-1826-SM-4E3K8 16.1
GTEX-139T6-1526-SM-5P9G6 16.0
GTEX-QMRM-1426-SM-4R1K8 15.6
GTEX-WZTO-0926-SM-4PQZ3 15.3
GTEX-144GM-0826-SM-5O98R 14.9
GTEX-11P7K-0626-SM-5985Z 14.7
GTEX-11DYG-2526-SM-5N9BB 13.8
GTEX-XOTO-2826-SM-4B65I 13.7
GTEX-OIZH-2026-SM-3NB1M 13.5
GTEX-11NSD-0826-SM-5986S 13.4
GTEX-REY6-2126-SM-48FD9 13.1
GTEX-11OF3-1726-SM-5GU5Q 12.6
GTEX-ZPU1-2026-SM-57WFI 12.3
GTEX-ZTX8-1026-SM-5EGHD 12.1
GTEX-QEG4-2226-SM-4R1JM 11.8
GTEX-YJ8A-1126-SM-5IFJU 11.8
GTEX-13FXS-2826-SM-5LZYC 11.6
GTEX-ZLFU-1726-SM-4WWBU 11.4
GTEX-ZVP2-0826-SM-59HJ6 11.0
GTEX-WFG7-1826-SM-3GIL1 10.9
GTEX-NFK9-2226-SM-3MJGP 10.7
GTEX-WH7G-1726-SM-4LVKY 10.7
GTEX-1399T-1226-SM-5P9J5 10.1
GTEX-11O72-2726-SM-5HL6K 9.9
GTEX-UTHO-2726-SM-4JBH9 9.9
GTEX-ZDYS-1226-SM-5IJF3 9.8
GTEX-S95S-1026-SM-4B64M 9.6
GTEX-VJYA-1226-SM-3GIJ6 9.6
GTEX-U412-2026-SM-4DXSI 9.5
GTEX-11TUW-2126-SM-5GU7B 9.4
GTEX-11TT1-2026-SM-5EQM8 9.1
GTEX-ZT9W-1626-SM-4YCDQ 9.0
GTEX-13O21-1126-SM-5N9EV 8.6
GTEX-U8XE-2526-SM-4E3IT 8.6
GTEX-14BMV-2326-SM-5RQJ4 8.5
GTEX-14E6E-1126-SM-5S2R4 8.3
GTEX-14ABY-0726-SM-5Q5DF 7.6
GTEX-111YS-1726-SM-5GIED 7.3
GTEX-117YX-1526-SM-5H12T 7.1
GTEX-13O61-1726-SM-5KM46 7.1
GTEX-12C56-1326-SM-5FQSV 6.9
GTEX-148VJ-1826-SM-5Q5DV 6.8
GTEX-T8EM-1826-SM-4DM7F 6.0
GTEX-QV44-1526-SM-4R1KI 5.9
GTEX-XAJ8-0626-SM-47JY4 5.7
GTEX-11EQ9-1726-SM-5HL6U 5.5
GTEX-QLQ7-1326-SM-4R1JY 5.5
GTEX-OOBJ-2026-SM-3NB1R 5.3
GTEX-13N2G-1826-SM-5KM1I 5.1
GTEX-132QS-1126-SM-5P9GC 4.9
GTEX-S3XE-1326-SM-4AD4H 4.9
GTEX-V955-1826-SM-4JBIL 4.8
GTEX-111CU-1526-SM-5N9FS 4.6
GTEX-ZTTD-2726-SM-57WFA 4.3
GTEX-12ZZZ-2026-SM-5LZWJ 4.2
GTEX-13OW8-0426-SM-5J2NR 4.0
GTEX-117YW-1426-SM-5EGGO 3.3
GTEX-12BJ1-1226-SM-5LUAE 3.3
GTEX-13G51-2326-SM-5LZXV 3.2
GTEX-XGQ4-1826-SM-4AT6F 3.2
GTEX-XPVG-2026-SM-4B65E 3.1
GTEX-RM2N-1126-SM-48FCY 2.8
GTEX-OOBK-2025-SM-3LK5S 2.5
GTEX-13NYS-1026-SM-5KLZT 2.4
GTEX-131XF-1926-SM-5DUW4 1.8
GTEX-13111-1326-SM-5GCNO 1.1
GTEX-12696-2226-SM-5EQ65 1.0
GTEX-NPJ8-2426-SM-3MJHL 0.9
GTEX-14C5O-2826-SM-5RQI6 0.8
GTEX-WK11-2626-SM-4OOSK 0.6
GTEX-13RTJ-2126-SM-5S2PZ 0.3
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

8.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 8.4
FF:10022-101D4 73,79,93 years, male 8.4

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