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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:65.9TPM
GTEx:31.9RPKM
FANTOM5:766.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA040098

  

Antibody CAB033576

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   Low  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

65.9
overview Male, age 54
Sample 1
TPM: 92.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 68.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 39.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 59.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 33.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 83.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 78.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 59.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 61.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 76.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 72.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 74.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 57.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

31.9

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 35.2
Samples: 149

Max RPKM: 84.2
Min RPKM: 12.4
Std RPKM: 10.4
Median RPKM: 33.1
GTEX-YEC3-2026-SM-4WWFL 84.2
GTEX-ZTSS-1226-SM-51MSZ 70.5
GTEX-11WQK-2526-SM-5CVL8 59.8
GTEX-Y3I4-1126-SM-4TT7Y 56.1
GTEX-14E6E-1726-SM-5S2R6 54.0
GTEX-YJ8A-1726-SM-5P9IQ 53.7
GTEX-13FH7-1626-SM-5J2O9 53.6
GTEX-1211K-1826-SM-5EGJ2 52.8
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 29.4
Samples: 196

Max RPKM: 126.7
Min RPKM: 7.9
Std RPKM: 11.1
Median RPKM: 28.2
GTEX-117YW-1826-SM-5PNY5 126.7
GTEX-OXRL-1426-SM-3NM9E 55.0
GTEX-V955-1626-SM-4JBHJ 54.3
GTEX-12WSL-1626-SM-5GCMU 52.7
GTEX-RWS6-1826-SM-47JXX 50.7
GTEX-WEY5-1426-SM-4LMJ3 50.1
GTEX-ZV6S-1226-SM-59HLH 50.1
GTEX-X5EB-0926-SM-46MVT 49.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

766.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 766.0
FF:10014-101C5 62,83,84 years, mixed 766.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.