Tissue expression of COL17A1 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	51.7	TPM
GTEx:	14.9	RPKM
FANTOM5:	5.6	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	Not detected
Myoepithelial cells:	Not detected

Antibody staining	Antibody HPA043673	Antibody HPA052963
Adipocytes	Not detected	Not detected
Glandular cells	Not detected	Low
Myoepithelial cells	Not detected	Not detected

BREAST - HPA RNA-seq

Average TPM	51.7

Female, age 52

Sample 1
TPM: 34.1

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 81.7

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 44.1

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 47.0

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	14.9

GTEx sample id

RPKM

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 14.9

Samples: 214

Max RPKM: 74.5
Min RPKM: 0
Std RPKM: 16.6
Median RPKM: 9.3

GTEX-13PL6-2926-SM-5L3I2

74.5

GTEX-ZC5H-2626-SM-5J2MG

68.7

GTEX-12ZZX-1126-SM-5EGKB

62.7

GTEX-WYBS-0926-SM-3NM94

57.2

GTEX-YFC4-1426-SM-5IFJG

54.6

GTEX-Y3IK-2326-SM-4WWDT

54.3

GTEX-WYVS-1726-SM-3NMAY

51.9

GTEX-R3RS-0626-SM-48FE1

51.8

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	5.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 5.6

FF:10080-102A8

77 years, female

5.6