Tissue expression of COL17A1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	45.3	TPM
GTEx:	41.9	RPKM
FANTOM5:	69.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA043673	Antibody HPA052963
Squamous epithelial cells	Low	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	45.3

Female, age 70

Sample 1
TPM: 38.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 45.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 51.5

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	41.9

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 41.9

Samples: 286

Max RPKM: 211.8
Min RPKM: 1.3
Std RPKM: 21
Median RPKM: 37.8

GTEX-RUSQ-0826-SM-47JWW

211.8

GTEX-S3XE-0926-SM-4AD4S

119.5

GTEX-Y111-1626-SM-57WCY

118.6

GTEX-1399U-1026-SM-5J1OC

103.6

GTEX-X4EO-1226-SM-4QARR

98.1

GTEX-11TT1-0526-SM-5P9JO

97.5

GTEX-RU72-0726-SM-46MUW

97.0

GTEX-ZDYS-0826-SM-4WWCR

94.7

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	69.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 69.2

FF:10015-101C6

68,74,75 years, mixed

69.2