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Gene name

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In atlas

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Method

Validation

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Searches

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Cell type

Expression

Tissue

Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

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Score

Score

Score

Antibodies

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COL17A1
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    TISSUE

  • CELL

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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.3TPM
GTEx:7.1RPKM
FANTOM5:12.1Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA043673

 

Antibody HPA052963

 

Glandular cells

Not detected   Medium  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

24.3

overview Male, age 62
Sample 1
TPM: 22.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 13.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 14.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 22.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 54.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 36.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 12.5
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 26.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 20.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

7.1

GTEx sample id

RPKM

3.96.29.60.016.00246810121416182022
 
3.96.29.60.016.00246810121416182022

Prostate

Prostate
RPKM: 7.1
Samples: 106

Max RPKM: 23.4
Min RPKM: 0
Std RPKM: 4.7
Median RPKM: 6.2
GTEX-QMRM-1426-SM-4R1K8 23.4
GTEX-S33H-1826-SM-4AD65 22.5
GTEX-XAJ8-0626-SM-47JY4 18.7
GTEX-YJ8A-1126-SM-5IFJU 16.0
GTEX-WFG8-1826-SM-4LVM4 15.9
GTEX-14BMV-2326-SM-5RQJ4 15.8
GTEX-13O21-1126-SM-5N9EV 15.3
GTEX-V1D1-1926-SM-4JBGX 15.3
GTEX-UTHO-2726-SM-4JBH9 15.0
GTEX-145LV-1226-SM-5S2QH 14.8
GTEX-WFG7-1826-SM-3GIL1 14.7
GTEX-117YX-1526-SM-5H12T 13.3
GTEX-1399T-1226-SM-5P9J5 12.9
GTEX-SNOS-1026-SM-4DM4Y 12.8
GTEX-13FHO-2826-SM-5K7ZA 12.5
GTEX-OIZH-2026-SM-3NB1M 12.0
GTEX-145LT-0626-SM-5O99E 11.8
GTEX-148VJ-1826-SM-5Q5DV 11.5
GTEX-11OF3-1726-SM-5GU5Q 11.4
GTEX-11DYG-2526-SM-5N9BB 11.3
GTEX-RWSA-2026-SM-47JX8 11.1
GTEX-14ABY-0726-SM-5Q5DF 10.5
GTEX-132QS-1126-SM-5P9GC 10.4
GTEX-VJYA-1226-SM-3GIJ6 10.1
GTEX-139T6-1526-SM-5P9G6 9.7
GTEX-ZTX8-1026-SM-5EGHD 9.7
GTEX-11P7K-0626-SM-5985Z 9.6
GTEX-ZT9W-1626-SM-4YCDQ 9.6
GTEX-111YS-1726-SM-5GIED 9.2
GTEX-WFON-1626-SM-4LVMV 9.1
GTEX-XPVG-2026-SM-4B65E 8.9
GTEX-1399R-0526-SM-5IJEF 8.8
GTEX-XGQ4-1826-SM-4AT6F 8.4
GTEX-QEG4-2226-SM-4R1JM 8.3
GTEX-U412-2026-SM-4DXSI 8.3
GTEX-13G51-2326-SM-5LZXV 7.9
GTEX-PLZ6-1126-SM-3P5ZR 7.8
GTEX-XMK1-1026-SM-4B65H 7.8
GTEX-Y9LG-1826-SM-4VBQC 7.7
GTEX-ZDYS-1226-SM-5IJF3 7.6
GTEX-YB5E-1826-SM-5IFI4 7.5
GTEX-WOFM-0326-SM-4OOSL 7.4
GTEX-11ZUS-2126-SM-5N9E6 7.2
GTEX-ZTTD-2726-SM-57WFA 7.2
GTEX-WZTO-0926-SM-4PQZ3 7.1
GTEX-11EQ9-1726-SM-5HL6U 6.8
GTEX-U4B1-1426-SM-4DXTX 6.8
GTEX-13OW8-0426-SM-5J2NR 6.6
GTEX-146FQ-1726-SM-5QGPX 6.6
GTEX-T8EM-1826-SM-4DM7F 6.6
GTEX-S95S-1026-SM-4B64M 6.5
GTEX-ZLFU-1726-SM-4WWBU 6.5
GTEX-117YW-1426-SM-5EGGO 6.2
GTEX-12C56-1326-SM-5FQSV 6.2
GTEX-13N2G-1826-SM-5KM1I 6.1
GTEX-YF7O-1926-SM-4W1YQ 6.1
GTEX-13FTW-1226-SM-5LZZ1 6.0
GTEX-QLQ7-1326-SM-4R1JY 6.0
GTEX-U3ZM-0926-SM-4DXSW 6.0
GTEX-XQ3S-2526-SM-4BOOG 6.0
GTEX-QV44-1526-SM-4R1KI 5.9
GTEX-11TT1-2026-SM-5EQM8 5.8
GTEX-13O61-1726-SM-5KM46 5.8
GTEX-X5EB-1826-SM-4E3K8 5.6
GTEX-12ZZZ-2026-SM-5LZWJ 5.5
GTEX-12BJ1-1226-SM-5LUAE 5.4
GTEX-13NYS-1026-SM-5KLZT 5.3
GTEX-U8XE-2526-SM-4E3IT 5.2
GTEX-Q2AI-1126-SM-48U19 5.0
GTEX-SNMC-0926-SM-4DM5U 5.0
GTEX-ZVP2-0826-SM-59HJ6 4.9
GTEX-11NSD-0826-SM-5986S 4.6
GTEX-ZZ64-0926-SM-5E44L 4.6
GTEX-111CU-1526-SM-5N9FS 4.5
GTEX-13FXS-2826-SM-5LZYC 4.5
GTEX-WH7G-1726-SM-4LVKY 4.2
GTEX-ZPU1-2026-SM-57WFI 4.2
GTEX-S4Q7-1026-SM-4AD75 4.1
GTEX-ZY6K-1526-SM-5GZXE 4.0
GTEX-11TUW-2126-SM-5GU7B 3.9
GTEX-S3XE-1326-SM-4AD4H 3.9
GTEX-Y8E4-2126-SM-5RQHO 3.9
GTEX-144GM-0826-SM-5O98R 3.8
GTEX-13111-1326-SM-5GCNO 3.5
GTEX-14E6E-1126-SM-5S2R4 3.2
GTEX-XOTO-2826-SM-4B65I 2.8
GTEX-111FC-2026-SM-5GZYO 2.5
GTEX-11O72-2726-SM-5HL6K 2.5
GTEX-11P82-1126-SM-5BC5K 2.5
GTEX-QV31-1026-SM-4R1K3 2.5
GTEX-ZUA1-2826-SM-59HLE 2.4
GTEX-RM2N-1126-SM-48FCY 2.3
GTEX-OOBJ-2026-SM-3NB1R 2.1
GTEX-132NY-2826-SM-5P9G2 2.0
GTEX-OOBK-2025-SM-3LK5S 1.9
GTEX-V955-1826-SM-4JBIL 1.9
GTEX-REY6-2126-SM-48FD9 1.7
GTEX-SJXC-2026-SM-4DM6N 1.5
GTEX-131XF-1926-SM-5DUW4 0.7
GTEX-NPJ8-2426-SM-3MJHL 0.7
GTEX-NFK9-2226-SM-3MJGP 0.3
GTEX-11WQK-2726-SM-5EQMU 0.2
GTEX-12696-2226-SM-5EQ65 0.2
GTEX-14C5O-2826-SM-5RQI6 0.1
GTEX-WK11-2626-SM-4OOSK 0.1
GTEX-13RTJ-2126-SM-5S2PZ 0.0
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

12.1

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 12.1
FF:10022-101D4 73,79,93 years, male 12.1

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