Tissue expression of COL17A1 - Staining in skin 2

SKIN - Expression summary

Protein expression

RNA expression

HPA:	770.5	TPM
GTEx:	208.5	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	Low
Langerhans:	Low
Melanocytes:	Medium

Antibody staining	Antibody HPA043673	Antibody HPA052963
Fibroblasts	Medium	Not detected
Keratinocytes	Low	Low
Langerhans	Low	Not detected
Melanocytes	Medium	Not detected

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Low

Antibody staining	Antibody HPA043673	Antibody HPA052963
Epidermal cells	Low	Low

SKIN - HPA RNA-seq

Average TPM	770.5

Female, age 34

Sample 1
TPM: 722.7

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 795.7

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 793.0

SKIN - GTEx RNA-seq

Average RPKM	208.5

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 221.9

Samples: 250

Max RPKM: 489
Min RPKM: 47.7
Std RPKM: 84.5
Median RPKM: 209.8

GTEX-145MI-0626-SM-5SI8S

489.0

GTEX-11P82-1426-SM-5BC5L

485.9

GTEX-WHPG-2626-SM-3NMBR

465.1

GTEX-ZTX8-1326-SM-4YCEL

453.3

GTEX-14C38-0726-SM-5SI6M

443.1

GTEX-WY7C-2126-SM-3NB2R

434.4

GTEX-XAJ8-1426-SM-47JYM

428.2

GTEX-13QBU-1226-SM-5LU4G

406.7

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Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 199.1

Samples: 357

Max RPKM: 515.4
Min RPKM: 29.7
Std RPKM: 75.5
Median RPKM: 189.4

GTEX-13YAN-0326-SM-5O9DF

515.4

GTEX-ZF2S-2326-SM-4WWCE

470.1

GTEX-12WSK-2326-SM-5GCOH

414.7

GTEX-145MI-0526-SM-5O9A8

412.7

GTEX-13O3O-0126-SM-5KM4E

411.5

GTEX-ZY6K-1826-SM-5GZXK

402.8

GTEX-11DXZ-2326-SM-5EGGV

398.3

GTEX-ZXG5-0126-SM-5GIEU

392.2

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SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue