Tissue expression of COL17A1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	31.4	TPM
GTEx:	20.1	RPKM
FANTOM5:	69.9	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA043673	Antibody HPA052963
Glandular cells	Not detected	High

SMALL INTESTINE - HPA RNA-seq

Average TPM	31.4

Male, age 65

Sample 1
TPM: 24.8

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 40.4

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 27.4

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 33.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	20.1

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 20.1

Samples: 88

Max RPKM: 88.1
Min RPKM: 0.1
Std RPKM: 16.8
Median RPKM: 18.4

GTEX-111YS-1426-SM-5GID8

88.1

GTEX-13FTW-2026-SM-5IJE2

62.1

GTEX-Y9LG-1626-SM-5IFHM

61.8

GTEX-XXEK-1026-SM-4BRUW

49.8

GTEX-11I78-1126-SM-5A5K5

47.3

GTEX-11DXZ-1326-SM-5H11X

45.3

GTEX-1122O-1326-SM-5H11F

45.2

GTEX-ZTX8-0526-SM-59HLD

43.5

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	69.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 69.9

FF:10024-101D6

15,40,85 years, mixed

69.9