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Gene name

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In atlas

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Validation

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Validation

Method

Validation

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Cell type

Expression

Tissue

Specificity

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Specificity

Tissue

Detectable

Cell line

Detectable

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Score

Score

Score

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COL17A1
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:12.9TPM
GTEx:8.3RPKM
FANTOM5:0.6Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Not detected
Leydig cells:Not detected
 

Antibody staining

Antibody HPA043673

 

Antibody HPA052963

 

Cells in seminiferous ducts

Medium   Low  

Leydig cells

Not detected   Low  
   
   
   

TESTIS - HPA RNA-seq

Average TPM

12.9

overview Male, age 56
Sample 1
TPM: 10.3
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 14.9
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 17.8
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 9.7
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 11.8
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 16.8
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 19.5
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 8.2
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 11.5
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 8.3
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

8.3

GTEx sample id

RPKM

6.88.19.53.113.502468101214161820
 
6.88.19.53.113.502468101214161820

Testis

Testis
RPKM: 8.3
Samples: 172

Max RPKM: 20
Min RPKM: 3.1
Std RPKM: 2.7
Median RPKM: 8.1
GTEX-PW2O-1426-SM-48TCD 20.0
GTEX-11LCK-2326-SM-5HL53 16.9
GTEX-111FC-1926-SM-5GZYC 15.4
GTEX-WOFM-1126-SM-4OOSB 15.3
GTEX-U8XE-0126-SM-4E3I3 14.9
GTEX-OOBK-2126-SM-3LK5T 14.8
GTEX-11WQK-2826-SM-5EQKH 14.0
GTEX-XPVG-2226-SM-4B65U 13.9
GTEX-145MH-2326-SM-5O9AW 13.5
GTEX-SNMC-1026-SM-4DM7K 12.8
GTEX-11NV4-1726-SM-5N9FC 12.5
GTEX-11TUW-2226-SM-5EQL9 12.4
GTEX-S7SE-0326-SM-4AT5Q 12.4
GTEX-11ONC-2226-SM-5HL6D 12.1
GTEX-11EI6-2226-SM-5EGJM 11.8
GTEX-OOBJ-2126-SM-3NB1N 11.6
GTEX-U3ZM-1626-SM-4DXSK 11.5
GTEX-13NYB-2226-SM-5MR58 11.3
GTEX-11GS4-2026-SM-5N9CP 11.2
GTEX-12696-0226-SM-5EGL3 11.2
GTEX-XPT6-1626-SM-4B655 11.2
GTEX-13N2G-0126-SM-5N9DV 11.0
GTEX-13FTW-1326-SM-5LZZD 10.9
GTEX-WZTO-0326-SM-4PQYZ 10.9
GTEX-145MO-0126-SM-5S2QU 10.7
GTEX-REY6-0126-SM-48FDT 10.7
GTEX-144GN-1626-SM-5Q5BU 10.6
GTEX-X261-2326-SM-4PQYU 10.6
GTEX-111VG-1926-SM-5GIDO 10.5
GTEX-QEG4-0126-SM-48TZE 10.5
GTEX-X3Y1-2626-SM-4PQZI 10.5
GTEX-11NUK-2626-SM-5A5MB 10.4
GTEX-WH7G-1926-SM-4LVMM 10.4
GTEX-12ZZY-0126-SM-5LZV2 10.3
GTEX-12WSL-2326-SM-5DUXQ 10.2
GTEX-Q2AH-1526-SM-48TZG 10.2
GTEX-YEC3-1726-SM-5IFIK 10.2
GTEX-13OW6-0126-SM-5IJGM 10.1
GTEX-V955-1926-SM-4KL1L 10.1
GTEX-14753-0626-SM-5Q5CY 10.0
GTEX-13NZB-2026-SM-5MR4M 9.8
GTEX-PLZ5-1526-SM-3P5ZX 9.8
GTEX-132QS-1226-SM-5P9GD 9.6
GTEX-S33H-0126-SM-4AD62 9.5
GTEX-XAJ8-1326-SM-47JYT 9.5
GTEX-12WSI-2126-SM-5GCMV 9.4
GTEX-13112-0226-SM-5P9IV 9.4
GTEX-VJYA-1426-SM-4KL1Y 9.4
GTEX-OXRL-2126-SM-3NM98 9.3
GTEX-Q2AI-1226-SM-48U14 9.3
GTEX-SNOS-1126-SM-4DM67 9.3
GTEX-YB5E-1926-SM-5IFIG 9.3
GTEX-R55E-0726-SM-48FCZ 9.2
GTEX-RM2N-1326-SM-48FCW 9.2
GTEX-WK11-0326-SM-4OOS6 9.2
GTEX-Y9LG-1726-SM-4VBQE 9.2
GTEX-XLM4-1526-SM-4AT6D 9.1
GTEX-13111-1526-SM-5EGJX 9.0
GTEX-13FLW-2126-SM-5N9FD 9.0
GTEX-T5JC-0726-SM-4DM55 9.0
GTEX-139TT-2226-SM-5LZWO 8.9
GTEX-13NZA-2526-SM-5IJFX 8.9
GTEX-Y5V6-1726-SM-4VDSZ 8.9
GTEX-ZAB5-2426-SM-5CVMW 8.9
GTEX-Y111-2426-SM-4TT23 8.8
GTEX-1212Z-0326-SM-5FQSJ 8.7
GTEX-139T6-1226-SM-5IFFC 8.7
GTEX-ZA64-1626-SM-5CVME 8.6
GTEX-ZDTT-2026-SM-5K7TY 8.6
GTEX-13O61-2026-SM-5J2M6 8.5
GTEX-QV31-1126-SM-4R1K4 8.5
GTEX-WHSB-2126-SM-4M1XF 8.5
GTEX-ZYT6-2726-SM-5GICP 8.5
GTEX-YJ89-0626-SM-4TT3Z 8.4
GTEX-ZYFC-0126-SM-5GIEH 8.4
GTEX-13O21-1226-SM-5J2MK 8.3
GTEX-RWSA-2426-SM-47JXR 8.3
GTEX-XBEC-0126-SM-4GIDT 8.3
GTEX-131XE-0426-SM-5IJF4 8.2
GTEX-13OW5-2526-SM-5L3I1 8.2
GTEX-147JS-0126-SM-5S2TW 8.2
GTEX-14ABY-0626-SM-5Q5C9 8.2
GTEX-S4Q7-1226-SM-4AD5I 8.2
GTEX-U4B1-1526-SM-4DXSL 8.2
GTEX-13VXU-0726-SM-5J2O7 8.1
GTEX-P4QS-2126-SM-3NMCF 8.1
GTEX-S95S-1126-SM-4B64E 8.1
GTEX-T8EM-0126-SM-4DM5R 8.1
GTEX-U8T8-1126-SM-4DXUE 8.1
GTEX-OHPM-2126-SM-3LK75 8.0
GTEX-QLQ7-1426-SM-4R1JX 8.0
GTEX-13O1R-0726-SM-5IJEI 7.9
GTEX-Z93S-1726-SM-5HL8G 7.9
GTEX-ZT9W-2226-SM-57WFU 7.8
GTEX-X5EB-2026-SM-4E3KA 7.7
GTEX-111CU-1726-SM-5EGHM 7.6
GTEX-11EQ9-1926-SM-5PNVV 7.6
GTEX-11NSD-1026-SM-5N9BE 7.6
GTEX-144GL-0726-SM-5LU4P 7.6
GTEX-R55C-1426-SM-48FED 7.6
GTEX-T6MN-2026-SM-4DM7L 7.6
GTEX-13FHP-2826-SM-5IJFW 7.5
GTEX-QMRM-1526-SM-4R1K6 7.5
GTEX-QV44-1726-SM-4R1KG 7.5
GTEX-11DXZ-2126-SM-59881 7.4
GTEX-11ZUS-2726-SM-5FQUA 7.4
GTEX-1399R-1626-SM-5P9GG 7.4
GTEX-13OVH-0726-SM-5N9BU 7.4
GTEX-ZV7C-2026-SM-5NQ8F 7.4
GTEX-13N1W-2626-SM-5IJEP 7.3
GTEX-ZPU1-2126-SM-57WED 7.3
GTEX-ZVTK-0126-SM-57WDG 7.3
GTEX-TKQ2-1526-SM-4DXUN 7.2
GTEX-WVLH-2626-SM-4MVNV 7.2
GTEX-ZDYS-1326-SM-5IJFF 7.2
GTEX-ZTSS-1526-SM-51MTC 7.2
GTEX-ZVZP-2226-SM-57WBF 7.2
GTEX-1399Q-2826-SM-5IJEZ 7.1
GTEX-XQ3S-2726-SM-4BOP2 7.1
GTEX-13OVL-0426-SM-5IFG6 7.0
GTEX-V1D1-2126-SM-4JBH4 7.0
GTEX-139TS-1726-SM-5IJG5 6.9
GTEX-111YS-2026-SM-5EGGL 6.8
GTEX-117XS-2026-SM-5GID1 6.8
GTEX-117YW-1526-SM-5EGGP 6.8
GTEX-11WQC-2326-SM-5EQKE 6.8
GTEX-144GM-0426-SM-5Q5C8 6.8
GTEX-S7PM-0626-SM-4AD4Q 6.8
GTEX-TKQ1-0926-SM-4DXU2 6.8
GTEX-WFON-2026-SM-4LVMW 6.7
GTEX-12C56-1426-SM-5FQSW 6.6
GTEX-QEG5-0126-SM-4R1JR 6.6
GTEX-S3XE-1526-SM-4AD5A 6.6
GTEX-UPJH-0126-SM-4IHLL 6.6
GTEX-XMK1-2026-SM-4B65K 6.6
GTEX-N7MS-0126-SM-3TW8O 6.4
GTEX-QLQW-1026-SM-447A9 6.4
GTEX-11O72-0726-SM-5P9GO 6.2
GTEX-RN64-2326-SM-48FDW 6.2
GTEX-NFK9-0126-SM-3LK5H 6.1
GTEX-11OF3-1826-SM-5987N 6.0
GTEX-ZT9X-1426-SM-5DUX1 6.0
GTEX-ZUA1-2726-SM-59HLJ 6.0
GTEX-SUCS-1326-SM-4DM5T 5.9
GTEX-ZTX8-1126-SM-51MRM 5.6
GTEX-XBED-2026-SM-4AT5D 5.3
GTEX-11P82-1526-SM-5BC5M 5.2
GTEX-OIZH-2126-SM-3NB1P 5.2
GTEX-U3ZH-1526-SM-4DXV1 5.2
GTEX-YFCO-1726-SM-4W21S 5.2
GTEX-12WSH-0326-SM-5GCNH 5.1
GTEX-14A6H-2326-SM-5Q5B5 5.1
GTEX-WFG8-1926-SM-4LVM1 5.1
GTEX-ZQUD-2026-SM-51MSM 5.0
GTEX-11P7K-1026-SM-5HL6Y 4.9
GTEX-XGQ4-2026-SM-4AT6G 4.8
GTEX-OIZI-0126-SM-3NB13 4.7
GTEX-12WSM-1326-SM-5GCP9 4.6
GTEX-1339X-1926-SM-5PNVP 4.5
GTEX-RUSQ-2126-SM-47JXK 4.5
GTEX-R55D-0126-SM-48FEL 4.4
GTEX-YEC4-1526-SM-4W1YU 4.4
GTEX-11TT1-2226-SM-5GU6B 4.1
GTEX-YF7O-2026-SM-4W1YE 4.1
GTEX-11EQ8-1426-SM-5EGJR 4.0
GTEX-P4QR-0226-SM-3NMCH 3.9
GTEX-ZZ64-1126-SM-5GZXY 3.8
GTEX-O5YT-2126-SM-3MJGD 3.6
GTEX-145LT-0426-SM-5LUAP 3.5
GTEX-147F4-0626-SM-5LUAK 3.4
GTEX-ZAB4-0126-SM-5CVMG 3.3
GTEX-Y8E4-2226-SM-5LU94 3.1
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

0.6

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 0.6
FF:10026-101D8 34,53,86 years, male 1.2
FF:10096-102C6 14-64 years, male 0.0

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