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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:53.9TPM
GTEx:38.4RPKM
FANTOM5:74.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA056557

  

Antibody CAB033426

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Low   Medium  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 
 
 

Antibody staining

Antibody HPA056557

  

Antibody CAB033426

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Not detected  

Chondrocytes

 Medium  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

53.9
N/A Female, age 80
Sample 1
TPM: 48.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 45.7
N/A Female, age 57
Sample 3
TPM: 36.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 79.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 58.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

38.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 41.0
Samples: 350

Max RPKM: 90.3
Min RPKM: 21.7
Std RPKM: 10.1
Median RPKM: 39.3
GTEX-14BMU-2126-SM-5S2TS 90.3
GTEX-13QBU-2526-SM-5LU4X 73.0
GTEX-S341-1626-SM-3K2B8 71.8
GTEX-147F3-0626-SM-5NQ9I 70.6
GTEX-WEY5-1926-SM-3GIL8 70.1
GTEX-R55G-2426-SM-2TC5I 70.0
GTEX-XUZC-1826-SM-4BRVO 69.9
GTEX-ZQG8-1526-SM-5HL65 69.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 34.3
Samples: 227

Max RPKM: 95
Min RPKM: 15.4
Std RPKM: 10
Median RPKM: 32.1
GTEX-1399S-1426-SM-5PNYQ 95.0
GTEX-1122O-0926-SM-5N9C9 80.3
GTEX-131XG-0126-SM-5K7UJ 73.2
GTEX-132QS-0826-SM-5K7WV 68.5
GTEX-Y5LM-0826-SM-4VDSW 64.7
GTEX-13FH7-1926-SM-5J2OL 56.4
GTEX-111YS-1326-SM-5EGGK 55.8
GTEX-13X6H-1726-SM-5Q5EH 55.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

74.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 74.4
FF:10010-101C1 65,65,76 years, mixed 74.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.