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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:34.1RPKM
FANTOM5:45.7Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA056557

 

Antibody CAB033426

 

Glial cells

Medium   Low  

Neuronal cells

Not detected   High  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

34.1

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 34.1
Samples: 94

Max RPKM: 135.5
Min RPKM: 5.8
Std RPKM: 25.3
Median RPKM: 26.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 135.5
GTEX-13OVL-0011-R1a-SM-5L3H5 125.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 102.5
GTEX-13N1W-0011-R1b-SM-5MR4T 99.8
GTEX-13S7M-0011-R1b-SM-5PNZE 77.3
GTEX-13G51-0011-R1a-SM-5LZYR 76.8
GTEX-12WSB-0011-R1b-SM-5P9EY 76.4
GTEX-13OW5-0011-R1b-SM-5L3GE 75.3
GTEX-WZTO-0011-R1B-SM-3NMAR 74.6
GTEX-UTHO-0011-R1A-SM-3GIJO 69.5
GTEX-13QJC-0011-R1b-SM-5S2UU 67.9
GTEX-P44H-0011-R1A-SM-3NM8J 65.5
GTEX-11GSO-0011-R1b-SM-57WD3 62.5
GTEX-13JVG-0011-R1a-SM-5KM32 60.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 54.5
GTEX-13NZA-0011-R1b-SM-5LUAF 54.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 48.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 48.1
GTEX-T6MN-0011-R1A-SM-32QOY 47.3
GTEX-145LS-0011-R1b-SM-5PNUP 46.8
GTEX-13JUV-0011-R1a-SM-5LZY4 46.8
GTEX-13N2G-0011-R1b-SM-5MR3G 46.6
GTEX-1212Z-0011-R1b-SM-5BC72 45.2
GTEX-11UD1-0011-R1b-SM-5BC7D 45.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 45.0
GTEX-N7MT-0011-R1a-SM-5SI7S 44.0
GTEX-145LU-0011-R1a-SM-5Q5CE 40.8
GTEX-QVUS-0011-R1A-SM-3GAD2 40.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 39.5
GTEX-ZUA1-0011-R1a-SM-4YCE2 39.1
GTEX-XMD1-0011-R1A-SM-4AT4C 38.1
GTEX-13FXS-0011-R1a-SM-5K7U6 37.8
GTEX-12WSF-0011-R1a-SM-5DUVI 37.1
GTEX-XOTO-0011-R1B-SM-4B65C 35.7
GTEX-12WSM-0011-R1a-SM-5LZW6 35.1
GTEX-WL46-0011-R1A-SM-3LK6M 33.0
GTEX-N7MS-0011-R1a-SM-2HMJG 32.8
GTEX-X4XX-0011-R1B-SM-3P622 31.0
GTEX-12WSH-0011-R1a-SM-5GU5V 30.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 29.9
GTEX-PVOW-0011-R1A-SM-32PL6 28.9
GTEX-1313W-0011-R1b-SM-5EQ4A 28.7
GTEX-13X6I-0011-R1b-SM-5PNZC 28.5
GTEX-QVJO-0011-R1A-SM-2S1QI 28.2
GTEX-12WSD-0011-R1b-SM-5LZVY 28.1
GTEX-13OW7-0011-R1b-SM-5L3HF 27.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 27.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 26.5
GTEX-11ZTS-0011-R1a-SM-5BC71 26.4
GTEX-14ASI-0011-R1b-SM-5S2TY 26.2
GTEX-QMR6-0011-R1A-SM-32PKW 25.6
GTEX-NPJ8-0011-R1a-SM-33HCB 25.3
GTEX-1399T-0011-R1b-SM-5DUWN 23.4
GTEX-13NYS-0011-R1b-SM-5MR55 21.9
GTEX-132Q8-0011-R1a-SM-5EGLK 21.6
GTEX-NPJ7-0011-R1a-SM-3GACT 21.6
GTEX-139TT-0011-R1a-SM-5LZVD 21.2
GTEX-X585-0011-R1B-SM-46MVE 20.9
GTEX-131YS-0011-R1a-SM-5DUXC 20.6
GTEX-13112-0011-R1b-SM-5HL7K 20.2
GTEX-YJ89-0011-R1a-SM-4RGLS 19.7
GTEX-13CF2-0011-R1a-SM-5LZY1 19.4
GTEX-QDT8-0011-R1A-SM-32PKS 18.5
GTEX-144GL-0011-R1a-SM-5PNZ5 18.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 18.1
GTEX-YFC4-0011-R1a-SM-4V6EH 17.9
GTEX-13OW8-0011-R1a-SM-5L3HI 17.8
GTEX-S7SE-0011-R1A-SM-2XCDE 17.6
GTEX-T5JC-0011-R1A-SM-32PM6 17.4
GTEX-WVLH-0011-R1A-SM-4MVOK 16.6
GTEX-11ONC-0011-R1a-SM-57WD4 16.3
GTEX-13FHO-0011-R1b-SM-5KLZG 16.3
GTEX-13NYB-0011-R1b-SM-5KM4F 16.1
GTEX-12WSE-0011-R1b-SM-5GU4V 15.3
GTEX-WWYW-0011-R1A-SM-3TW8G 15.2
GTEX-13O3O-0011-R1b-SM-5KM2K 14.7
GTEX-13SLW-0011-R1a-SM-5S2W7 14.3
GTEX-RNOR-0011-R1A-SM-5SI8F 14.2
GTEX-144GO-0011-R1a-SM-5PNWO 14.2
GTEX-PWO3-0011-R1A-SM-2I5EW 12.8
GTEX-TSE9-0011-R1A-SM-3DB7E 12.7
GTEX-R55E-0011-R1A-SM-2TC6N 12.2
GTEX-13FLW-0011-R1b-SM-5LZX2 12.0
GTEX-13FHP-0011-R1b-SM-5K7XL 11.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 11.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 11.6
GTEX-131XH-0011-R1a-SM-5DUWA 11.1
GTEX-13FTY-0011-R1a-SM-5LZXE 9.7
GTEX-13PDP-0011-R1a-SM-5PNX5 9.1
GTEX-ZF28-0011-R1a-SM-4WWD1 7.4
GTEX-ZE7O-0011-R1a-SM-57WDM 7.3
GTEX-NL3H-0011-R1a-SM-48TDJ 7.1
GTEX-139T8-0011-R1a-SM-5HL75 6.2
GTEX-145MH-0011-R1b-SM-5PNWY 5.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

45.7

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 45.7
FF:10153-102I9 76 years, female 72.6
FF:10169-103B7 60 years, female 41.6
FF:10374-105G5 89 years, female 22.9

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