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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.2TPM
GTEx:15.5RPKM
FANTOM5:99.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA044653

  

Antibody CAB004079

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA044653

  

Antibody CAB004079

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

41.2
N/A Female, age 80
Sample 1
TPM: 19.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 10.3
N/A Female, age 57
Sample 3
TPM: 10.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 75.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 90.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.5

GTEx sample id

RPKM
8.512.317.81.829.901020304050607080
 
8.512.317.81.829.901020304050607080

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.7
Samples: 350

Max RPKM: 82.8
Min RPKM: 1.8
Std RPKM: 9.9
Median RPKM: 12.2
GTEX-111VG-2326-SM-5N9BK 82.8
GTEX-13NYS-0226-SM-5MR49 64.1
GTEX-13JVG-0226-SM-5J1MW 59.1
GTEX-11GSO-2326-SM-5A5LX 58.8
GTEX-Q734-1826-SM-2I3EL 47.4
GTEX-XMD2-0226-SM-4WWEE 46.9
GTEX-13NZA-0126-SM-5K7UH 45.0
GTEX-ZVZO-0226-SM-5A5LA 41.3
Show all
9.314.921.71.838.101020304050607080
 
9.314.921.71.838.101020304050607080

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 16.8
Samples: 227

Max RPKM: 85.4
Min RPKM: 1.8
Std RPKM: 11.4
Median RPKM: 14.9
GTEX-Y9LG-1226-SM-4VBQA 85.4
GTEX-ZVZP-1126-SM-5GICU 85.0
GTEX-11EM3-1126-SM-5A5KM 60.9
GTEX-XBED-1326-SM-4AT4F 46.9
GTEX-13PL7-1226-SM-5SIAR 44.8
GTEX-ZZPU-0326-SM-5N9BJ 44.5
GTEX-ZV7C-0826-SM-59HK8 44.0
GTEX-13X6H-1726-SM-5Q5EH 41.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

99.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 99.7
FF:10010-101C1 65,65,76 years, mixed 99.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.