We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SPI1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:3.7RPKM
FANTOM5:21.9Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA044653

 

Antibody CAB004079

 

Glial cells

Not detected   Low  

Neuronal cells

Not detected   Not detected  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

3.7

GTEx sample id

RPKM

1.72.75.10.610.00246810121416
 
1.72.75.10.610.00246810121416

Brain - Hippocampus

Brain - Hippocampus
RPKM: 3.7
Samples: 94

Max RPKM: 16.8
Min RPKM: 0.6
Std RPKM: 3
Median RPKM: 2.6
GTEX-13NYS-0011-R1b-SM-5MR55 16.8
GTEX-13OW5-0011-R1b-SM-5L3GE 13.2
GTEX-132Q8-0011-R1a-SM-5EGLK 11.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 10.4
GTEX-QVUS-0011-R1A-SM-3GAD2 10.0
GTEX-X4XX-0011-R1B-SM-3P622 9.8
GTEX-131YS-0011-R1a-SM-5DUXC 9.4
GTEX-13N1W-0011-R1b-SM-5MR4T 9.0
GTEX-PWO3-0011-R1A-SM-2I5EW 8.6
GTEX-QVJO-0011-R1A-SM-2S1QI 8.4
GTEX-X585-0011-R1B-SM-46MVE 7.7
GTEX-XMD1-0011-R1A-SM-4AT4C 7.3
GTEX-13JUV-0011-R1a-SM-5LZY4 7.0
GTEX-NPJ7-0011-R1a-SM-3GACT 6.9
GTEX-WWYW-0011-R1A-SM-3TW8G 6.6
GTEX-144GO-0011-R1a-SM-5PNWO 6.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 5.9
GTEX-1399T-0011-R1b-SM-5DUWN 5.5
GTEX-13X6I-0011-R1b-SM-5PNZC 5.4
GTEX-11ZTS-0011-R1a-SM-5BC71 5.3
GTEX-T5JC-0011-R1A-SM-32PM6 5.3
GTEX-13G51-0011-R1a-SM-5LZYR 5.3
GTEX-R55E-0011-R1A-SM-2TC6N 5.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 5.1
GTEX-145LS-0011-R1b-SM-5PNUP 5.0
GTEX-N7MT-0011-R1a-SM-5SI7S 4.8
GTEX-13FHO-0011-R1b-SM-5KLZG 4.7
GTEX-UTHO-0011-R1A-SM-3GIJO 4.3
GTEX-1313W-0011-R1b-SM-5EQ4A 3.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 3.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 3.7
GTEX-12WSF-0011-R1a-SM-5DUVI 3.6
GTEX-QDT8-0011-R1A-SM-32PKS 3.5
GTEX-TSE9-0011-R1A-SM-3DB7E 3.5
GTEX-13N2G-0011-R1b-SM-5MR3G 3.5
GTEX-13QJC-0011-R1b-SM-5S2UU 3.4
GTEX-13SLW-0011-R1a-SM-5S2W7 3.4
GTEX-ZF28-0011-R1a-SM-4WWD1 3.3
GTEX-12WSH-0011-R1a-SM-5GU5V 3.1
GTEX-13S7M-0011-R1b-SM-5PNZE 3.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 3.0
GTEX-P44H-0011-R1A-SM-3NM8J 2.9
GTEX-YJ89-0011-R1a-SM-4RGLS 2.8
GTEX-13OW8-0011-R1a-SM-5L3HI 2.8
GTEX-XOTO-0011-R1B-SM-4B65C 2.7
GTEX-11ONC-0011-R1a-SM-57WD4 2.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 2.7
GTEX-13JVG-0011-R1a-SM-5KM32 2.6
GTEX-11GSO-0011-R1b-SM-57WD3 2.6
GTEX-WL46-0011-R1A-SM-3LK6M 2.6
GTEX-RNOR-0011-R1A-SM-5SI8F 2.5
GTEX-145MH-0011-R1b-SM-5PNWY 2.5
GTEX-QMR6-0011-R1A-SM-32PKW 2.4
GTEX-YFC4-0011-R1a-SM-4V6EH 2.3
GTEX-13OW7-0011-R1b-SM-5L3HF 2.3
GTEX-13FXS-0011-R1a-SM-5K7U6 2.3
GTEX-12WSB-0011-R1b-SM-5P9EY 2.2
GTEX-N7MS-0011-R1a-SM-2HMJG 2.2
GTEX-13O3O-0011-R1b-SM-5KM2K 2.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 2.1
GTEX-13CF2-0011-R1a-SM-5LZY1 2.1
GTEX-NPJ8-0011-R1a-SM-33HCB 2.1
GTEX-11UD1-0011-R1b-SM-5BC7D 1.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 1.9
GTEX-13NZA-0011-R1b-SM-5LUAF 1.9
GTEX-13112-0011-R1b-SM-5HL7K 1.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 1.8
GTEX-13FHP-0011-R1b-SM-5K7XL 1.8
GTEX-NL3H-0011-R1a-SM-48TDJ 1.7
GTEX-13OVL-0011-R1a-SM-5L3H5 1.7
GTEX-WZTO-0011-R1B-SM-3NMAR 1.7
GTEX-WVLH-0011-R1A-SM-4MVOK 1.7
GTEX-13NYB-0011-R1b-SM-5KM4F 1.4
GTEX-12WSD-0011-R1b-SM-5LZVY 1.4
GTEX-13FLW-0011-R1b-SM-5LZX2 1.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 1.3
GTEX-1212Z-0011-R1b-SM-5BC72 1.3
GTEX-131XH-0011-R1a-SM-5DUWA 1.3
GTEX-T6MN-0011-R1A-SM-32QOY 1.3
GTEX-14ASI-0011-R1b-SM-5S2TY 1.2
GTEX-S7SE-0011-R1A-SM-2XCDE 1.2
GTEX-145LU-0011-R1a-SM-5Q5CE 1.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 1.1
GTEX-144GL-0011-R1a-SM-5PNZ5 1.0
GTEX-12WSE-0011-R1b-SM-5GU4V 1.0
GTEX-139T8-0011-R1a-SM-5HL75 1.0
GTEX-PVOW-0011-R1A-SM-32PL6 1.0
GTEX-13PDP-0011-R1a-SM-5PNX5 0.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 0.9
GTEX-139TT-0011-R1a-SM-5LZVD 0.8
GTEX-12WSM-0011-R1a-SM-5LZW6 0.7
GTEX-ZE7O-0011-R1a-SM-57WDM 0.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 0.6
GTEX-13FTY-0011-R1a-SM-5LZXE 0.6
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

21.9

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 21.9
FF:10153-102I9 76 years, female 40.4
FF:10169-103B7 60 years, female 18.9
FF:10374-105G5 89 years, female 6.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.