Tissue expression of ARFGEF1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	13.0	TPM
GTEx:	7.0	RPKM
FANTOM5:	40.1	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Not detected
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA023399	Antibody HPA023822
Adipocytes	Not detected	Not detected
Chondrocytes	Not detected	Not detected
Fibroblasts	Medium	Medium
Peripheral nerve	Low	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA023399	Antibody HPA023822
Adipocytes	Not detected	Not detected
Fibroblasts	Low	Low
Peripheral nerve	Not detected	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	13.0

Female, age 80

Sample 1
TPM: 12.3

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 12.5

Female, age 57

Sample 3
TPM: 11.5

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 14.7

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 14.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.0

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 7.5

Samples: 350

Max RPKM: 13
Min RPKM: 4.6
Std RPKM: 1.2
Median RPKM: 7.4

GTEX-SNMC-1326-SM-2XCFK

13.0

GTEX-S32W-2226-SM-2XCAY

12.2

GTEX-OHPK-0226-SM-3MJH6

11.4

GTEX-P44H-0326-SM-2XCES

11.1

GTEX-OIZI-0226-SM-2XCEE

11.0

GTEX-13S7M-0226-SM-5S2UG

10.8

GTEX-QDT8-0226-SM-32PL4

10.5

GTEX-RM2N-1726-SM-2TF55

10.5

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 6.2

Samples: 227

Max RPKM: 8.7
Min RPKM: 2.9
Std RPKM: 1
Median RPKM: 6.2

GTEX-11NV4-1426-SM-5BC4W

8.7

GTEX-WFJO-1026-SM-3GIKL

8.5

GTEX-ZE7O-1526-SM-5J1NH

8.5

GTEX-ZF29-0826-SM-5S2NP

8.5

GTEX-14A6H-1026-SM-5SIAZ

8.4

GTEX-11GS4-1026-SM-5N9DE

8.3

GTEX-UPK5-1826-SM-3GAEB

8.3

GTEX-13N11-1826-SM-5IJDS

8.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	40.1

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 40.1

FF:10010-101C1

65,65,76 years, mixed

40.1