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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:197.4TPM
GTEx:45.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:High
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA018257

 

Endothelial cells

High  

Glial cells

High  

Neuronal cells

Medium  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

197.4

N/A Male, age 5
Sample 1
TPM: 157.2
overview Female, age 40
Sample 2
TPM: 144.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 290.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

45.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 44.9
Samples: 114

Max RPKM: 119.4
Min RPKM: 14.7
Std RPKM: 15.7
Median RPKM: 44.2
GTEX-X585-3026-SM-46MWF 119.4
GTEX-X4XX-3026-SM-3NMB2 94.5
GTEX-13VXU-2926-SM-5LU5C 71.9
GTEX-WL46-2926-SM-3LK82 70.6
GTEX-13FHO-3026-SM-5J1O9 69.8
GTEX-14BMV-3026-SM-5S2PQ 67.1
GTEX-11OC5-0726-SM-5P9JK 66.9
GTEX-11DXY-3226-SM-5GIDE 66.6
GTEX-13SLX-3126-SM-5S2Q5 66.5
GTEX-13OW8-2826-SM-5L3GC 64.0
GTEX-1313W-3126-SM-5LZUI 63.5
GTEX-13OW6-3026-SM-5J2MI 63.3
GTEX-WWYW-3126-SM-3NB39 61.5
GTEX-XOTO-3026-SM-4B65M 61.0
GTEX-11ONC-2926-SM-5P9JM 60.9
GTEX-13FLW-1426-SM-5K7YE 60.7
GTEX-13NYC-2826-SM-5K7WR 59.8
GTEX-14ASI-3026-SM-5S2PN 59.0
GTEX-ZUA1-3026-SM-59HJC 58.9
GTEX-TSE9-3026-SM-3DB76 58.5
GTEX-WHSE-3026-SM-3P5ZH 58.1
GTEX-ZYFD-3026-SM-5E44C 57.7
GTEX-13O3O-3126-SM-5KM3H 57.6
GTEX-T5JC-2426-SM-3NMDB 57.4
GTEX-13OVH-3026-SM-5MR4N 57.1
GTEX-T6MN-2626-SM-32PMQ 56.7
GTEX-WVLH-3026-SM-3MJG9 56.4
GTEX-145MF-2726-SM-5O995 56.2
GTEX-WZTO-2926-SM-3NM9I 55.3
GTEX-145LS-3126-SM-5Q5BY 55.0
GTEX-13NYS-3126-SM-5KLYV 54.9
GTEX-117XS-3026-SM-5N9CA 52.9
GTEX-12ZZX-2926-SM-5GCOQ 52.9
GTEX-UTHO-3026-SM-3GAFB 52.8
GTEX-145MH-3026-SM-5Q5DZ 52.7
GTEX-13FXS-3126-SM-5J2NN 51.2
GTEX-13O3Q-2926-SM-5KM45 50.6
GTEX-11GSO-2926-SM-5HL73 50.4
GTEX-12WSC-3026-SM-5GCNF 50.3
GTEX-YJ89-3026-SM-5IFJI 49.8
GTEX-YFC4-3126-SM-5PNV6 49.5
GTEX-Z93S-2926-SM-57WB9 49.0
GTEX-11PRG-2926-SM-5987A 48.7
GTEX-XLM4-3026-SM-4AT6L 48.2
GTEX-Y111-2726-SM-4TT3N 47.1
GTEX-R55F-1326-SM-5S2V4 45.9
GTEX-1192X-3126-SM-5N9BY 45.8
GTEX-12ZZY-3026-SM-5GCOU 45.8
GTEX-ZAK1-3026-SM-5S2MJ 45.8
GTEX-11GS4-3126-SM-5A5LH 45.5
GTEX-11ZUS-2926-SM-5FQSL 45.5
GTEX-QMR6-1426-SM-32PLA 45.0
GTEX-RNOR-2326-SM-2TF4I 45.0
GTEX-144GL-3026-SM-5Q5CW 44.7
GTEX-11WQK-3026-SM-5EQL6 44.5
GTEX-111FC-3126-SM-5GZZ2 44.3
GTEX-PVOW-2526-SM-2XCF7 44.3
GTEX-145MG-3026-SM-5RQJA 44.0
GTEX-Q2AG-2926-SM-2HMJ3 43.5
GTEX-Y8DK-0826-SM-4TT3T 43.5
GTEX-ZVT3-3026-SM-5E43N 43.1
GTEX-13NYB-3026-SM-5IJD7 43.0
GTEX-QVJO-1426-SM-2S1QY 42.9
GTEX-144FL-3026-SM-5O99C 42.8
GTEX-1128S-2726-SM-5H12C 42.7
GTEX-11NUK-2926-SM-5A5MD 42.7
GTEX-131YS-3126-SM-5KLYT 42.5
GTEX-1399T-3026-SM-5KLZC 41.9
GTEX-13PL6-3126-SM-5LUAR 41.5
GTEX-12126-1026-SM-5P9JJ 41.1
GTEX-12ZZW-2926-SM-5LZUP 39.9
GTEX-11DXW-1126-SM-5H12Q 39.3
GTEX-T2IS-3026-SM-32QPM 37.9
GTEX-12ZZZ-3026-SM-5BC67 37.8
GTEX-13QIC-2926-SM-5J2NF 37.7
GTEX-132Q8-3026-SM-5PNVG 37.3
GTEX-13FHP-3026-SM-5IJBS 37.2
GTEX-12WSH-3026-SM-5CVNI 36.9
GTEX-13IVO-2926-SM-5L3CZ 36.9
GTEX-13X6J-3026-SM-5Q5CU 36.0
GTEX-ZZPT-3026-SM-5GZXH 35.8
GTEX-QVUS-2826-SM-3GADB 35.1
GTEX-ZAJG-3126-SM-5HL9J 34.9
GTEX-11OF3-2926-SM-5HL78 34.2
GTEX-12WSD-3126-SM-5HL7P 33.7
GTEX-13OW7-3026-SM-5L3GY 33.7
GTEX-131XW-3126-SM-5LZUC 32.7
GTEX-13JUV-2926-SM-5LZX7 31.7
GTEX-13S7M-3126-SM-5RQJQ 31.7
GTEX-1117F-3226-SM-5N9CT 31.3
GTEX-OXRN-2426-SM-2I5EQ 30.9
GTEX-11EI6-3026-SM-5GZZO 30.8
GTEX-13OVJ-2826-SM-5L3GW 30.6
GTEX-11GSP-3226-SM-5986O 30.4
GTEX-QDT8-2926-SM-32PKC 29.9
GTEX-14A5I-2926-SM-5Q5CQ 29.7
GTEX-RU72-3026-SM-5SI7Y 29.5
GTEX-13JVG-3126-SM-5L3FH 29.3
GTEX-13PVQ-3026-SM-5SI93 28.9
GTEX-11EMC-3226-SM-5EGKW 28.6
GTEX-NPJ8-1526-SM-2D7VU 28.0
GTEX-11O72-2926-SM-5BC4V 27.8
GTEX-139T8-1026-SM-5J2MC 27.1
GTEX-11TTK-2926-SM-5PNYP 26.2
GTEX-NPJ7-2726-SM-2I3FT 24.2
GTEX-1445S-3026-SM-5O9BR 23.1
GTEX-N7MT-1126-SM-5SI7V 22.9
GTEX-147GR-3026-SM-5S2ML 21.8
GTEX-11NV4-2126-SM-5N9DS 21.1
GTEX-ZE7O-3126-SM-5HL5X 21.0
GTEX-13X6K-2926-SM-5Q5D5 20.1
GTEX-13G51-3026-SM-5IJB8 19.8
GTEX-12WSA-2926-SM-5EQ4D 16.7
GTEX-PWO3-0926-SM-2I5EY 14.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 45.1
Samples: 108

Max RPKM: 110.1
Min RPKM: 10.9
Std RPKM: 19.5
Median RPKM: 45.3
GTEX-X585-0011-R10A-SM-46MUY 110.1
GTEX-13QJC-0011-R10a-SM-5SI63 97.2
GTEX-X4XX-0011-R10B-SM-46MWO 94.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 90.8
GTEX-NL3H-0011-R10A-SM-2I3E9 86.1
GTEX-145MH-0011-R10b-SM-5PNUK 73.9
GTEX-13N1W-0011-R10b-SM-5MR4H 73.5
GTEX-12WSE-0011-R10b-SM-5P9JV 70.7
GTEX-145MG-0011-R10a-SM-5PNWG 69.2
GTEX-131XH-0011-R10a-SM-5EGLJ 68.0
GTEX-13NYS-0011-R10a-SM-5MR4S 66.9
GTEX-WWYW-0011-R10A-SM-3NB35 66.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 66.4
GTEX-WZTO-0011-R10B-SM-4E3KB 66.2
GTEX-T6MN-0011-R10A-SM-32QP7 65.9
GTEX-WVLH-0011-R10A-SM-3MJFM 64.7
GTEX-1313W-0011-R10b-SM-5DUXA 63.6
GTEX-13FHO-0011-R10b-SM-5J2MM 63.4
GTEX-13SLX-0011-R10a-SM-5P9HV 62.6
GTEX-13O3O-0011-R10a-SM-5LUA9 61.8
GTEX-WL46-0011-R10A-SM-3MJFQ 60.1
GTEX-13OW7-0011-R10a-SM-5L3H3 59.4
GTEX-13O3Q-0011-R10b-SM-5KM39 58.1
GTEX-12WSC-0011-R10a-SM-5GU57 57.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 57.8
GTEX-13S7M-0011-R10b-SM-5PNZB 57.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 57.1
GTEX-XLM4-0011-R10A-SM-4AT5P 55.9
GTEX-12WSF-0011-R10a-SM-5LZVH 55.7
GTEX-14BIN-0011-R10a-SM-5S2UA 55.4
GTEX-T5JC-0011-R10A-SM-32PM2 54.7
GTEX-131YS-0011-R10b-SM-5EQ5N 54.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 54.4
GTEX-YFC4-0011-R10a-SM-4SOK5 54.2
GTEX-ZF28-0011-R10a-SM-4WWEH 54.2
GTEX-S7SE-0011-R10A-SM-2XCDF 54.1
GTEX-13FXS-0011-R10a-SM-5J2MA 53.7
GTEX-13QIC-0011-R10a-SM-5O9C7 53.5
GTEX-13X6I-0011-R10a-SM-5PNWI 53.4
GTEX-13X6K-0011-R10a-SM-5P9JR 52.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 52.3
GTEX-13OVL-0011-R10a-SM-5L3GS 51.8
GTEX-13X6J-0011-R10b-SM-5PNWA 50.4
GTEX-12WSM-0011-R10a-SM-5DUWV 50.2
GTEX-13CZV-0011-R10b-SM-5LZYD 50.1
GTEX-13NYB-0011-R10a-SM-5KM43 49.2
GTEX-145LS-0011-R10a-SM-5PNUQ 49.0
GTEX-N7MT-0011-R10A-SM-2I3E1 49.0
GTEX-N7MS-0011-R10A-SM-2HMJK 48.1
GTEX-147GR-0011-R10b-SM-5S2UM 47.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 47.8
GTEX-X4EP-0011-R10B-SM-4QASJ 46.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 45.7
GTEX-13FLW-0011-R10b-SM-5LZZF 45.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 45.3
GTEX-YJ89-0011-R10a-SM-4SOK9 44.5
GTEX-QVUS-0011-R10A-SM-3GIK3 42.7
GTEX-13OW8-0011-R10a-SM-5L3H6 42.6
GTEX-12WSH-0011-R10a-SM-5LZUS 42.4
GTEX-14BIL-0011-R10a-SM-5SI75 41.3
GTEX-11H98-0011-R10b-SM-5NQ98 41.0
GTEX-13OW6-0011-R10a-SM-5L3HE 40.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 39.9
GTEX-13G51-0011-R10b-SM-5LZYF 39.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 39.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 39.2
GTEX-145LU-0011-R10a-SM-5PNWJ 38.9
GTEX-147F4-0011-R10b-SM-5S2WC 37.8
GTEX-TSE9-0011-R10A-SM-3DB7O 37.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 36.8
GTEX-ZUA1-0011-R10a-SM-51MT6 35.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 35.8
GTEX-13JUV-0011-R10b-SM-5LZXR 35.7
GTEX-QMR6-0011-R10A-SM-32PKO 35.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 34.0
GTEX-X261-0011-R10B-SM-4E3JT 33.4
GTEX-QDT8-0011-R10A-SM-32PKG 33.2
GTEX-Z93S-0011-R10a-SM-4RGNM 32.5
GTEX-11WQK-0011-R10a-SM-5BC6R 32.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 30.3
GTEX-13N2G-0011-R10a-SM-5MR34 30.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 29.1
GTEX-ZVT3-0011-R10b-SM-57WB6 28.4
GTEX-13SLW-0011-R10a-SM-5S2UI 27.9
GTEX-12WSD-0011-R10b-SM-5GU79 26.5
GTEX-OXRN-0011-R10A-SM-2I5GC 26.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 24.3
GTEX-12126-0011-R10b-SM-5BC6T 24.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 24.2
GTEX-11WQC-0011-R10a-SM-57WCT 23.8
GTEX-13IVO-0011-R10a-SM-5LZY3 22.9
GTEX-RVPU-0011-R10A-SM-2XCAH 22.5
GTEX-ZXG5-0011-R10a-SM-57WDD 22.4
GTEX-13JVG-0011-R10b-SM-5KM2P 22.0
GTEX-NL4W-0011-R10A-SM-2I3DY 21.8
GTEX-14753-0011-R10b-SM-5S2WE 21.2
GTEX-P44H-0011-R10A-SM-2XCEK 20.5
GTEX-131XW-0011-R10a-SM-5DUVA 20.1
GTEX-1445S-0011-R10a-SM-5PNWB 19.3
GTEX-12WSA-0011-R10b-SM-5P9ET 18.3
GTEX-1477Z-0011-R10b-SM-5S2RF 18.1
GTEX-OXRO-0011-R10A-SM-2I5EH 17.7
GTEX-139TS-0011-R10a-SM-5K7TU 17.6
GTEX-11ZUS-0011-R10b-SM-5BC79 17.4
GTEX-13NZA-0011-R10b-SM-5KM54 16.1
GTEX-XMD1-0011-R10A-SM-4AT4A 13.5
GTEX-ZV68-0011-R10a-SM-51MT7 12.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 10.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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