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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:73.0TPM
GTEx:20.8RPKM
FANTOM5:104.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA018257

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

73.0

overview Male, age 65
Sample 1
TPM: 54.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 100.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 52.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 84.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

20.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 20.8
Samples: 88

Max RPKM: 42.3
Min RPKM: 8.3
Std RPKM: 6
Median RPKM: 20
GTEX-111YS-1426-SM-5GID8 42.3
GTEX-XXEK-1026-SM-4BRUW 39.4
GTEX-ZYWO-1526-SM-5SIAL 33.2
GTEX-WQUQ-2426-SM-4MVNW 33.2
GTEX-VUSG-1726-SM-4KKZL 32.6
GTEX-ZLV1-1126-SM-4WWBW 32.5
GTEX-14E6E-1626-SM-5RQI7 31.1
GTEX-1122O-1326-SM-5H11F 31.0
GTEX-ZYFG-2026-SM-5E43Y 27.7
GTEX-11DXX-1626-SM-5H11H 27.4
GTEX-1192X-2526-SM-59868 27.1
GTEX-14DAR-1426-SM-5RQIR 26.7
GTEX-UPK5-2026-SM-4JBIM 26.0
GTEX-ZTPG-2626-SM-57WFX 25.2
GTEX-11XUK-1426-SM-5EQMG 24.3
GTEX-133LE-1426-SM-5IFH1 24.2
GTEX-WFG8-1626-SM-4LVMB 24.2
GTEX-13QBU-1926-SM-5IJEW 24.2
GTEX-13FTW-2026-SM-5IJE2 23.9
GTEX-Z9EW-0926-SM-5CVMM 23.8
GTEX-1399R-2026-SM-5K7WN 23.8
GTEX-Y5LM-1626-SM-4VDTB 23.6
GTEX-13111-1426-SM-5DUW3 23.3
GTEX-WFJO-0926-SM-4LVM2 23.2
GTEX-ZVT2-2126-SM-5NQ93 23.1
GTEX-13CF3-1226-SM-5LZXN 23.1
GTEX-XUZC-1426-SM-4BRV3 22.9
GTEX-ZTSS-0926-SM-59865 22.7
GTEX-139YR-2226-SM-5IFFW 22.6
GTEX-ZC5H-2326-SM-4WAYT 22.5
GTEX-11NSD-1726-SM-5N9C3 22.4
GTEX-ZTX8-0526-SM-59HLD 22.2
GTEX-13O21-1026-SM-5IJDU 22.0
GTEX-XAJ8-0526-SM-47JYK 21.9
GTEX-ZPCL-1726-SM-57WEO 21.3
GTEX-WFG7-1726-SM-4LVME 21.3
GTEX-YF7O-1826-SM-5IFIU 21.3
GTEX-ZZ64-0526-SM-5GZXM 21.2
GTEX-11I78-1126-SM-5A5K5 21.2
GTEX-145LT-1026-SM-5LU9O 20.8
GTEX-13O61-1326-SM-5KM31 20.7
GTEX-11EQ9-1326-SM-5985X 20.6
GTEX-13113-1226-SM-5EGHT 20.2
GTEX-13OVI-1926-SM-5IJCG 20.0
GTEX-131XG-1726-SM-5LZUR 20.0
GTEX-11DXZ-1326-SM-5H11X 19.8
GTEX-XGQ4-1326-SM-4GIDU 19.7
GTEX-Y3IK-1726-SM-4YCCR 19.7
GTEX-117YX-0326-SM-5GICL 19.6
GTEX-YEC4-1726-SM-4W21E 19.2
GTEX-13PL7-2626-SM-5IFH4 19.1
GTEX-XMK1-1826-SM-4B66F 19.0
GTEX-13D11-0726-SM-5LZZB 18.9
GTEX-13RTK-0826-SM-5Q5C6 18.9
GTEX-ZP4G-1626-SM-57WGD 18.9
GTEX-11P82-0826-SM-5P9GU 18.9
GTEX-ZEX8-1826-SM-57WBH 18.8
GTEX-X15G-1426-SM-4PQZK 18.8
GTEX-1399S-2026-SM-5KM4B 18.4
GTEX-ZVP2-1726-SM-5GU5P 18.3
GTEX-12BJ1-1926-SM-5HL9Z 18.1
GTEX-ZA64-1226-SM-5HL7B 18.0
GTEX-WRHK-1026-SM-4MVOD 17.9
GTEX-139T6-1026-SM-5IJGC 17.8
GTEX-YB5E-1526-SM-5IFIE 17.8
GTEX-ZF2S-1726-SM-57WFT 17.3
GTEX-13FH7-1226-SM-5IJFK 17.2
GTEX-11P7K-1626-SM-5GU63 17.0
GTEX-111CU-1326-SM-5NQ8L 17.0
GTEX-XBED-1426-SM-4AT4G 16.9
GTEX-145ME-0926-SM-5O9AR 16.7
GTEX-148VJ-2226-SM-5NQ9M 16.4
GTEX-ZQG8-2526-SM-57WEQ 16.1
GTEX-12WSK-1526-SM-5CVNO 16.0
GTEX-1399U-2126-SM-5IFEZ 15.5
GTEX-ZQUD-0926-SM-57WE3 14.8
GTEX-ZPIC-2326-SM-57WDW 14.6
GTEX-ZXES-1526-SM-5NQ95 13.4
GTEX-WH7G-1626-SM-4LVMY 13.2
GTEX-Y9LG-1626-SM-5IFHM 12.7
GTEX-WEY5-1526-SM-4LMJF 12.3
GTEX-131XF-1326-SM-5GCMQ 12.1
GTEX-ZVZP-1826-SM-5GZXB 11.8
GTEX-VJYA-0926-SM-4KL1N 11.4
GTEX-11VI4-1626-SM-5EQKO 11.3
GTEX-Y114-1426-SM-4TT6W 11.1
GTEX-X5EB-1626-SM-4E3IV 10.9
GTEX-ZLFU-1526-SM-4WWBT 8.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

104.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 104.7
FF:10024-101D6 15,40,85 years, mixed 104.7

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