We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PFKP
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.4TPM
GTEx:8.7RPKM
FANTOM5:22.2Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA018257

 

Cells in red pulp

Low  

Cells in white pulp

Medium  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

33.4

overview Female, age 60
Sample 1
TPM: 35.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 37.3
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 28.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 38.1
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 27.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

8.7

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 8.7
Samples: 104

Max RPKM: 19.2
Min RPKM: 4.9
Std RPKM: 2.7
Median RPKM: 8.2
GTEX-131XE-1126-SM-5EGHW 19.2
GTEX-XXEK-0126-SM-4BRVU 18.0
GTEX-Q2AH-0226-SM-48U1I 17.1
GTEX-O5YT-0926-SM-48TDG 16.3
GTEX-13N11-0126-SM-5KM2Z 14.8
GTEX-UPK5-1626-SM-4JBHI 12.8
GTEX-1399R-0226-SM-5IJGG 12.5
GTEX-OIZH-0926-SM-48TBR 12.4
GTEX-ZP4G-0326-SM-4YCEF 12.4
GTEX-R55G-0226-SM-48FEI 12.0
GTEX-XPVG-0626-SM-4B65B 12.0
GTEX-ZYWO-0226-SM-5GZX3 11.9
GTEX-13S86-0126-SM-5S2PI 11.8
GTEX-XMK1-0126-SM-4B65F 11.8
GTEX-RUSQ-0126-SM-47JWV 11.7
GTEX-XQ8I-1726-SM-4BOQB 11.6
GTEX-XGQ4-0126-SM-4AT4H 10.8
GTEX-XV7Q-0126-SM-4BRVK 10.8
GTEX-Y8LW-0126-SM-4VBS1 10.8
GTEX-146FR-1926-SM-5NQA6 10.7
GTEX-X585-1826-SM-4QAS3 10.7
GTEX-QCQG-0226-SM-48U28 10.4
GTEX-WHWD-0126-SM-4OORS 10.4
GTEX-YB5E-0426-SM-5IFHR 10.4
GTEX-ZLWG-0426-SM-4WWFA 10.3
GTEX-11XUK-0426-SM-5EQML 10.1
GTEX-12WSJ-0526-SM-5GCOZ 10.1
GTEX-12WSK-0126-SM-5GCO7 10.0
GTEX-1122O-0526-SM-5N9DM 9.9
GTEX-Y3IK-0126-SM-4WWE9 9.9
GTEX-Y5LM-0326-SM-4VBRN 9.8
GTEX-Z9EW-0726-SM-5HL9H 9.8
GTEX-12WSN-0126-SM-5DUX5 9.7
GTEX-QLQW-0126-SM-447BK 9.7
GTEX-13CF3-0226-SM-5J1NW 9.6
GTEX-QV31-0126-SM-447BP 9.6
GTEX-11P81-1326-SM-5GU5S 9.4
GTEX-U3ZH-0126-SM-4DXUK 9.4
GTEX-ZAB5-0526-SM-5CVMU 9.3
GTEX-13FH7-1326-SM-5IFG8 9.2
GTEX-XUJ4-0226-SM-4BOP8 9.0
GTEX-OOBJ-0926-SM-48TDO 8.9
GTEX-PX3G-0926-SM-48U12 8.8
GTEX-U3ZN-0126-SM-4DXUM 8.8
GTEX-11NSD-0426-SM-5N9CR 8.7
GTEX-146FQ-0626-SM-5LU9U 8.7
GTEX-POMQ-0126-SM-48TD6 8.6
GTEX-PW2O-0126-SM-48TC8 8.6
GTEX-ZLFU-0526-SM-4WWBN 8.6
GTEX-14E6E-1226-SM-5S2R5 8.5
GTEX-WFON-0126-SM-4LVM9 8.5
GTEX-139YR-0426-SM-5IFFV 8.3
GTEX-11P7K-0426-SM-5BC5H 8.1
GTEX-QMRM-0226-SM-4R1K7 8.1
GTEX-X3Y1-0126-SM-4PQZA 8.1
GTEX-14DAR-0326-SM-5S2PS 8.0
GTEX-13U4I-1626-SM-5IFFR 7.9
GTEX-131XG-0426-SM-5IFGD 7.7
GTEX-ZVP2-0526-SM-51MSC 7.7
GTEX-ZYFG-0726-SM-5GIDX 7.7
GTEX-13X6H-0726-SM-5Q5BX 7.6
GTEX-QV44-0126-SM-4R1KH 7.6
GTEX-XAJ8-0126-SM-47JYG 7.6
GTEX-P4QS-0926-SM-48TBS 7.5
GTEX-ZV6S-0826-SM-5NQ6Z 7.5
GTEX-117YX-2126-SM-5GIEL 7.3
GTEX-YB5K-1926-SM-4VDT4 7.3
GTEX-ZZPU-0126-SM-5E446 7.2
GTEX-11VI4-0126-SM-5GU6Z 7.1
GTEX-12WSG-0926-SM-5EGIH 7.1
GTEX-13VXT-1326-SM-5LU3Y 7.1
GTEX-11LCK-0126-SM-5A5M5 7.0
GTEX-VJYA-0126-SM-4KL1P 7.0
GTEX-144GN-2126-SM-5O99D 6.8
GTEX-X4LF-0226-SM-4QAS8 6.8
GTEX-132QS-0226-SM-5IFFZ 6.7
GTEX-QDVN-0526-SM-48TZ4 6.7
GTEX-UJHI-0126-SM-4IHLP 6.7
GTEX-YEC4-0126-SM-4W21T 6.7
GTEX-145MN-0126-SM-5RQHY 6.6
GTEX-T5JW-0126-SM-4DM6K 6.6
GTEX-12BJ1-0726-SM-5EGGF 6.5
GTEX-13PVR-0326-SM-5RQJY 6.4
GTEX-13111-0126-SM-5EGHO 6.3
GTEX-S3XE-0626-SM-4AD6B 6.3
GTEX-U4B1-0526-SM-4DXTK 6.3
GTEX-ZVZP-0726-SM-59HKA 6.3
GTEX-1399S-0226-SM-5IFFG 6.2
GTEX-139T6-0226-SM-5IFGZ 6.2
GTEX-W5WG-0626-SM-4SOID 6.2
GTEX-YFCO-0926-SM-5LUA5 6.2
GTEX-11DXX-0726-SM-5H12X 6.1
GTEX-Q734-0226-SM-48U1A 5.9
GTEX-ZPU1-1026-SM-4YCEQ 5.9
GTEX-13PL7-1126-SM-5MR5O 5.6
GTEX-ZDTT-1026-SM-5KM19 5.6
GTEX-PLZ6-0126-SM-48TC6 5.5
GTEX-11EQ9-0426-SM-5A5JY 5.2
GTEX-Y3I4-0126-SM-4TT26 5.2
GTEX-S4Z8-0226-SM-4AD5K 5.1
GTEX-Y114-0726-SM-4TT6U 5.1
GTEX-1211K-0426-SM-5FQTP 5.0
GTEX-147F3-0126-SM-5NQBJ 5.0
GTEX-P4PP-0926-SM-48TBZ 4.9
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

22.2

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 22.2
FF:10025-101D7 39,50,70 years, male 22.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.