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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:55.4TPM
GTEx:45.2RPKM
FANTOM5:128.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA047815

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

55.4

overview Male, age 65
Sample 1
TPM: 44.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 56.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 68.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 51.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

45.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 45.2
Samples: 88

Max RPKM: 99.5
Min RPKM: 23.8
Std RPKM: 16.4
Median RPKM: 39.6
GTEX-1192X-2526-SM-59868 99.5
GTEX-111CU-1326-SM-5NQ8L 91.5
GTEX-Y5LM-1626-SM-4VDTB 85.0
GTEX-13O21-1026-SM-5IJDU 83.5
GTEX-117YX-0326-SM-5GICL 82.6
GTEX-13QBU-1926-SM-5IJEW 80.8
GTEX-12WSK-1526-SM-5CVNO 73.7
GTEX-XMK1-1826-SM-4B66F 72.9
GTEX-13OVI-1926-SM-5IJCG 72.5
GTEX-13111-1426-SM-5DUW3 70.7
GTEX-ZQG8-2526-SM-57WEQ 68.0
GTEX-145ME-0926-SM-5O9AR 63.7
GTEX-ZQUD-0926-SM-57WE3 63.1
GTEX-ZTPG-2626-SM-57WFX 62.7
GTEX-131XG-1726-SM-5LZUR 61.6
GTEX-WFG8-1626-SM-4LVMB 59.4
GTEX-13113-1226-SM-5EGHT 58.2
GTEX-ZF2S-1726-SM-57WFT 56.6
GTEX-148VJ-2226-SM-5NQ9M 56.3
GTEX-ZVT2-2126-SM-5NQ93 54.8
GTEX-WEY5-1526-SM-4LMJF 54.5
GTEX-UPK5-2026-SM-4JBIM 52.8
GTEX-VUSG-1726-SM-4KKZL 51.4
GTEX-ZYWO-1526-SM-5SIAL 51.3
GTEX-13RTK-0826-SM-5Q5C6 49.9
GTEX-WFG7-1726-SM-4LVME 49.9
GTEX-Y3IK-1726-SM-4YCCR 49.3
GTEX-ZP4G-1626-SM-57WGD 49.2
GTEX-ZLV1-1126-SM-4WWBW 48.1
GTEX-XGQ4-1326-SM-4GIDU 47.1
GTEX-WRHK-1026-SM-4MVOD 47.0
GTEX-XAJ8-0526-SM-47JYK 46.1
GTEX-Y114-1426-SM-4TT6W 45.6
GTEX-139YR-2226-SM-5IFFW 45.0
GTEX-11DXX-1626-SM-5H11H 44.7
GTEX-13O61-1326-SM-5KM31 44.4
GTEX-X15G-1426-SM-4PQZK 43.0
GTEX-ZPIC-2326-SM-57WDW 41.9
GTEX-145LT-1026-SM-5LU9O 41.6
GTEX-13FTW-2026-SM-5IJE2 41.3
GTEX-139T6-1026-SM-5IJGC 40.2
GTEX-XXEK-1026-SM-4BRUW 39.8
GTEX-11P82-0826-SM-5P9GU 39.8
GTEX-WFJO-0926-SM-4LVM2 39.7
GTEX-ZC5H-2326-SM-4WAYT 39.5
GTEX-111YS-1426-SM-5GID8 39.5
GTEX-ZXES-1526-SM-5NQ95 39.1
GTEX-WQUQ-2426-SM-4MVNW 38.7
GTEX-ZZ64-0526-SM-5GZXM 38.6
GTEX-11P7K-1626-SM-5GU63 38.0
GTEX-XUZC-1426-SM-4BRV3 37.8
GTEX-WH7G-1626-SM-4LVMY 37.6
GTEX-13PL7-2626-SM-5IFH4 37.4
GTEX-14DAR-1426-SM-5RQIR 37.2
GTEX-11EQ9-1326-SM-5985X 37.1
GTEX-YEC4-1726-SM-4W21E 36.5
GTEX-1399S-2026-SM-5KM4B 36.3
GTEX-11NSD-1726-SM-5N9C3 36.3
GTEX-131XF-1326-SM-5GCMQ 36.1
GTEX-Z9EW-0926-SM-5CVMM 35.4
GTEX-YB5E-1526-SM-5IFIE 35.3
GTEX-11DXZ-1326-SM-5H11X 35.0
GTEX-1122O-1326-SM-5H11F 34.9
GTEX-ZVP2-1726-SM-5GU5P 34.8
GTEX-ZLFU-1526-SM-4WWBT 34.7
GTEX-ZPCL-1726-SM-57WEO 34.3
GTEX-ZYFG-2026-SM-5E43Y 34.1
GTEX-ZTSS-0926-SM-59865 33.7
GTEX-13D11-0726-SM-5LZZB 33.1
GTEX-11XUK-1426-SM-5EQMG 32.4
GTEX-133LE-1426-SM-5IFH1 32.3
GTEX-VJYA-0926-SM-4KL1N 31.3
GTEX-12BJ1-1926-SM-5HL9Z 31.3
GTEX-ZVZP-1826-SM-5GZXB 30.6
GTEX-ZEX8-1826-SM-57WBH 30.4
GTEX-X5EB-1626-SM-4E3IV 30.4
GTEX-XBED-1426-SM-4AT4G 29.9
GTEX-Y9LG-1626-SM-5IFHM 29.6
GTEX-14E6E-1626-SM-5RQI7 29.0
GTEX-11I78-1126-SM-5A5K5 29.0
GTEX-11VI4-1626-SM-5EQKO 27.6
GTEX-YF7O-1826-SM-5IFIU 27.6
GTEX-ZA64-1226-SM-5HL7B 27.4
GTEX-1399U-2126-SM-5IFEZ 27.4
GTEX-ZTX8-0526-SM-59HLD 27.1
GTEX-13FH7-1226-SM-5IJFK 26.9
GTEX-1399R-2026-SM-5K7WN 25.3
GTEX-13CF3-1226-SM-5LZXN 23.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

128.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 128.4
FF:10024-101D6 15,40,85 years, mixed 128.4

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The Human Protein Atlas project is funded
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