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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:47.0TPM
GTEx:13.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA045591

 

Antibody HPA048380

 

Antibody CAB014876

 

Endothelial cells

Low   Not detected   Low  

Glial cells

Not detected   Not detected   Medium  

Neuronal cells

Low   Low   Medium  

Neuropil

Not detected   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

47.0

N/A Male, age 5
Sample 1
TPM: 50.6
overview Female, age 40
Sample 2
TPM: 34.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 56.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 12.4
Samples: 114

Max RPKM: 24.5
Min RPKM: 4.9
Std RPKM: 3.6
Median RPKM: 12.4
GTEX-PVOW-2526-SM-2XCF7 24.5
GTEX-T2IS-3026-SM-32QPM 19.8
GTEX-T5JC-2426-SM-3NMDB 19.3
GTEX-WZTO-2926-SM-3NM9I 19.1
GTEX-WVLH-3026-SM-3MJG9 18.5
GTEX-TSE9-3026-SM-3DB76 17.7
GTEX-QMR6-1426-SM-32PLA 17.5
GTEX-RNOR-2326-SM-2TF4I 17.5
GTEX-13NYC-2826-SM-5K7WR 17.4
GTEX-145MH-3026-SM-5Q5DZ 17.2
GTEX-WWYW-3126-SM-3NB39 16.7
GTEX-T6MN-2626-SM-32PMQ 16.5
GTEX-ZUA1-3026-SM-59HJC 16.5
GTEX-12WSC-3026-SM-5GCNF 16.1
GTEX-14BMV-3026-SM-5S2PQ 16.1
GTEX-WL46-2926-SM-3LK82 16.1
GTEX-YFC4-3126-SM-5PNV6 16.0
GTEX-11DXY-3226-SM-5GIDE 15.9
GTEX-WHSE-3026-SM-3P5ZH 15.9
GTEX-X4XX-3026-SM-3NMB2 15.9
GTEX-12ZZX-2926-SM-5GCOQ 15.8
GTEX-13FLW-1426-SM-5K7YE 15.8
GTEX-ZAK1-3026-SM-5S2MJ 15.8
GTEX-13FHO-3026-SM-5J1O9 15.6
GTEX-13VXU-2926-SM-5LU5C 15.6
GTEX-QVJO-1426-SM-2S1QY 15.6
GTEX-11ZUS-2926-SM-5FQSL 15.4
GTEX-11NUK-2926-SM-5A5MD 15.3
GTEX-13FXS-3126-SM-5J2NN 15.3
GTEX-131YS-3126-SM-5KLYT 15.2
GTEX-UTHO-3026-SM-3GAFB 15.2
GTEX-111FC-3126-SM-5GZZ2 15.1
GTEX-XLM4-3026-SM-4AT6L 15.1
GTEX-1313W-3126-SM-5LZUI 14.9
GTEX-Z93S-2926-SM-57WB9 14.8
GTEX-13O3Q-2926-SM-5KM45 14.7
GTEX-144GL-3026-SM-5Q5CW 14.6
GTEX-14ASI-3026-SM-5S2PN 14.5
GTEX-11PRG-2926-SM-5987A 14.2
GTEX-11DXW-1126-SM-5H12Q 13.9
GTEX-13OW6-3026-SM-5J2MI 13.9
GTEX-QDT8-2926-SM-32PKC 13.9
GTEX-13SLX-3126-SM-5S2Q5 13.8
GTEX-117XS-3026-SM-5N9CA 13.7
GTEX-12ZZY-3026-SM-5GCOU 13.7
GTEX-ZYFD-3026-SM-5E44C 13.7
GTEX-13OVH-3026-SM-5MR4N 13.6
GTEX-11GSO-2926-SM-5HL73 13.5
GTEX-145LS-3126-SM-5Q5BY 13.5
GTEX-R55F-1326-SM-5S2V4 13.5
GTEX-Y8DK-0826-SM-4TT3T 13.5
GTEX-Q2AG-2926-SM-2HMJ3 13.0
GTEX-12126-1026-SM-5P9JJ 12.9
GTEX-145MF-2726-SM-5O995 12.9
GTEX-X585-3026-SM-46MWF 12.7
GTEX-XOTO-3026-SM-4B65M 12.6
GTEX-YJ89-3026-SM-5IFJI 12.4
GTEX-13FHP-3026-SM-5IJBS 12.3
GTEX-Y111-2726-SM-4TT3N 12.3
GTEX-12ZZZ-3026-SM-5BC67 12.2
GTEX-1399T-3026-SM-5KLZC 12.2
GTEX-14A5I-2926-SM-5Q5CQ 12.1
GTEX-QVUS-2826-SM-3GADB 12.0
GTEX-13NYB-3026-SM-5IJD7 11.9
GTEX-13OW8-2826-SM-5L3GC 11.9
GTEX-13X6J-3026-SM-5Q5CU 11.8
GTEX-1192X-3126-SM-5N9BY 11.7
GTEX-OXRN-2426-SM-2I5EQ 11.7
GTEX-1128S-2726-SM-5H12C 11.5
GTEX-145MG-3026-SM-5RQJA 11.5
GTEX-132Q8-3026-SM-5PNVG 11.4
GTEX-ZVT3-3026-SM-5E43N 11.3
GTEX-NPJ7-2726-SM-2I3FT 11.2
GTEX-11ONC-2926-SM-5P9JM 11.1
GTEX-13NYS-3126-SM-5KLYV 11.0
GTEX-13QIC-2926-SM-5J2NF 10.7
GTEX-11OF3-2926-SM-5HL78 10.6
GTEX-13X6K-2926-SM-5Q5D5 10.6
GTEX-NPJ8-1526-SM-2D7VU 10.6
GTEX-11GS4-3126-SM-5A5LH 10.3
GTEX-13PL6-3126-SM-5LUAR 10.2
GTEX-RU72-3026-SM-5SI7Y 10.1
GTEX-13O3O-3126-SM-5KM3H 10.0
GTEX-12WSH-3026-SM-5CVNI 9.9
GTEX-ZE7O-3126-SM-5HL5X 9.9
GTEX-147GR-3026-SM-5S2ML 9.8
GTEX-13G51-3026-SM-5IJB8 9.7
GTEX-131XW-3126-SM-5LZUC 9.3
GTEX-13S7M-3126-SM-5RQJQ 9.0
GTEX-N7MT-1126-SM-5SI7V 8.9
GTEX-11EMC-3226-SM-5EGKW 8.8
GTEX-ZAJG-3126-SM-5HL9J 8.8
GTEX-11EI6-3026-SM-5GZZO 8.5
GTEX-11O72-2926-SM-5BC4V 8.5
GTEX-12ZZW-2926-SM-5LZUP 8.5
GTEX-11OC5-0726-SM-5P9JK 8.4
GTEX-1117F-3226-SM-5N9CT 8.1
GTEX-13OW7-3026-SM-5L3GY 8.0
GTEX-12WSD-3126-SM-5HL7P 7.9
GTEX-PWO3-0926-SM-2I5EY 7.8
GTEX-139T8-1026-SM-5J2MC 7.7
GTEX-144FL-3026-SM-5O99C 7.6
GTEX-11NV4-2126-SM-5N9DS 7.4
GTEX-11TTK-2926-SM-5PNYP 7.3
GTEX-13JVG-3126-SM-5L3FH 7.0
GTEX-13JUV-2926-SM-5LZX7 6.9
GTEX-1445S-3026-SM-5O9BR 6.9
GTEX-11GSP-3226-SM-5986O 6.8
GTEX-ZZPT-3026-SM-5GZXH 6.8
GTEX-13OVJ-2826-SM-5L3GW 6.5
GTEX-13IVO-2926-SM-5L3CZ 6.4
GTEX-11WQK-3026-SM-5EQL6 6.2
GTEX-13PVQ-3026-SM-5SI93 6.2
GTEX-12WSA-2926-SM-5EQ4D 4.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.1
Samples: 108

Max RPKM: 24.2
Min RPKM: 4.5
Std RPKM: 5.1
Median RPKM: 14.1
GTEX-WVLH-0011-R10A-SM-3MJFM 24.2
GTEX-T6MN-0011-R10A-SM-32QP7 24.0
GTEX-S7SE-0011-R10A-SM-2XCDF 23.7
GTEX-WZTO-0011-R10B-SM-4E3KB 22.7
GTEX-145MH-0011-R10b-SM-5PNUK 22.6
GTEX-QDT8-0011-R10A-SM-32PKG 22.5
GTEX-WL46-0011-R10A-SM-3MJFQ 22.2
GTEX-X585-0011-R10A-SM-46MUY 22.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 21.6
GTEX-1313W-0011-R10b-SM-5DUXA 21.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 21.3
GTEX-YFC4-0011-R10a-SM-4SOK5 21.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 20.7
GTEX-12WSE-0011-R10b-SM-5P9JV 20.4
GTEX-T5JC-0011-R10A-SM-32PM2 20.4
GTEX-13O3Q-0011-R10b-SM-5KM39 20.0
GTEX-13X6K-0011-R10a-SM-5P9JR 20.0
GTEX-145MG-0011-R10a-SM-5PNWG 19.6
GTEX-131YS-0011-R10b-SM-5EQ5N 19.4
GTEX-12WSC-0011-R10a-SM-5GU57 19.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 19.2
GTEX-QMR6-0011-R10A-SM-32PKO 19.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 19.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 18.7
GTEX-12WSF-0011-R10a-SM-5LZVH 18.6
GTEX-WWYW-0011-R10A-SM-3NB35 18.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 18.4
GTEX-NL3H-0011-R10A-SM-2I3E9 18.3
GTEX-12WSM-0011-R10a-SM-5DUWV 18.0
GTEX-131XH-0011-R10a-SM-5EGLJ 18.0
GTEX-YJ89-0011-R10a-SM-4SOK9 17.9
GTEX-13X6J-0011-R10b-SM-5PNWA 17.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 17.8
GTEX-XLM4-0011-R10A-SM-4AT5P 17.7
GTEX-X4XX-0011-R10B-SM-46MWO 17.4
GTEX-14BIN-0011-R10a-SM-5S2UA 16.7
GTEX-N7MS-0011-R10A-SM-2HMJK 16.6
GTEX-QVUS-0011-R10A-SM-3GIK3 16.6
GTEX-147GR-0011-R10b-SM-5S2UM 16.4
GTEX-13FLW-0011-R10b-SM-5LZZF 16.3
GTEX-13QIC-0011-R10a-SM-5O9C7 16.0
GTEX-ZF28-0011-R10a-SM-4WWEH 15.7
GTEX-13S7M-0011-R10b-SM-5PNZB 15.6
GTEX-13SLX-0011-R10a-SM-5P9HV 15.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 15.3
GTEX-13FHO-0011-R10b-SM-5J2MM 15.2
GTEX-145LS-0011-R10a-SM-5PNUQ 15.1
GTEX-11H98-0011-R10b-SM-5NQ98 15.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 15.0
GTEX-14BIL-0011-R10a-SM-5SI75 15.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 14.9
GTEX-Z93S-0011-R10a-SM-4RGNM 14.9
GTEX-13FXS-0011-R10a-SM-5J2MA 14.7
GTEX-N7MT-0011-R10A-SM-2I3E1 14.2
GTEX-13OVL-0011-R10a-SM-5L3GS 14.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 13.9
GTEX-13N1W-0011-R10b-SM-5MR4H 13.8
GTEX-ZDXO-0011-R10a-SM-4WWD8 13.5
GTEX-13CZV-0011-R10b-SM-5LZYD 13.4
GTEX-13OW7-0011-R10a-SM-5L3H3 13.4
GTEX-ZUA1-0011-R10a-SM-51MT6 13.4
GTEX-P44H-0011-R10A-SM-2XCEK 13.0
GTEX-12126-0011-R10b-SM-5BC6T 12.9
GTEX-NPJ8-0011-R10A-SM-2YUMO 12.9
GTEX-TSE9-0011-R10A-SM-3DB7O 12.9
GTEX-13NYB-0011-R10a-SM-5KM43 12.5
GTEX-13O3O-0011-R10a-SM-5LUA9 12.5
GTEX-13NYS-0011-R10a-SM-5MR4S 12.4
GTEX-13X6I-0011-R10a-SM-5PNWI 12.4
GTEX-13JUV-0011-R10b-SM-5LZXR 12.2
GTEX-13OW6-0011-R10a-SM-5L3HE 12.2
GTEX-13G51-0011-R10b-SM-5LZYF 11.8
GTEX-12WSH-0011-R10a-SM-5LZUS 11.7
GTEX-OXRN-0011-R10A-SM-2I5GC 11.5
GTEX-11ZUS-0011-R10b-SM-5BC79 11.3
GTEX-13OW8-0011-R10a-SM-5L3H6 11.2
GTEX-X4EP-0011-R10B-SM-4QASJ 10.8
GTEX-ZVT3-0011-R10b-SM-57WB6 10.6
GTEX-147F4-0011-R10b-SM-5S2WC 10.3
GTEX-145LU-0011-R10a-SM-5PNWJ 10.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 9.8
GTEX-13QJC-0011-R10a-SM-5SI63 9.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 9.2
GTEX-12WSD-0011-R10b-SM-5GU79 9.1
GTEX-RVPU-0011-R10A-SM-2XCAH 9.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 8.9
GTEX-13SLW-0011-R10a-SM-5S2UI 8.8
GTEX-139TS-0011-R10a-SM-5K7TU 8.7
GTEX-13N2G-0011-R10a-SM-5MR34 8.7
GTEX-11WQC-0011-R10a-SM-57WCT 8.3
GTEX-NL4W-0011-R10A-SM-2I3DY 7.9
GTEX-ZXG5-0011-R10a-SM-57WDD 7.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 7.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 7.3
GTEX-13NZA-0011-R10b-SM-5KM54 6.9
GTEX-XMD1-0011-R10A-SM-4AT4A 6.9
GTEX-1445S-0011-R10a-SM-5PNWB 6.7
GTEX-13JVG-0011-R10b-SM-5KM2P 6.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 6.6
GTEX-11WQK-0011-R10a-SM-5BC6R 6.3
GTEX-X261-0011-R10B-SM-4E3JT 6.3
GTEX-OXRO-0011-R10A-SM-2I5EH 6.1
GTEX-ZV68-0011-R10a-SM-51MT7 5.8
GTEX-14753-0011-R10b-SM-5S2WE 5.7
GTEX-1477Z-0011-R10b-SM-5S2RF 5.7
GTEX-131XW-0011-R10a-SM-5DUVA 5.0
GTEX-12WSA-0011-R10b-SM-5P9ET 4.5
GTEX-13IVO-0011-R10a-SM-5LZY3 4.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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