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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:173.7TPM
GTEx:54.0RPKM
FANTOM5:289.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody CAB004360

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

173.7

overview Male, age 65
Sample 1
TPM: 143.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 183.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 173.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 194.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

54.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 54.0
Samples: 88

Max RPKM: 71.3
Min RPKM: 38.6
Std RPKM: 6.4
Median RPKM: 54.1
GTEX-XGQ4-1326-SM-4GIDU 71.3
GTEX-13FTW-2026-SM-5IJE2 68.5
GTEX-145LT-1026-SM-5LU9O 67.9
GTEX-ZVT2-2126-SM-5NQ93 64.1
GTEX-WFG8-1626-SM-4LVMB 63.8
GTEX-ZZ64-0526-SM-5GZXM 63.2
GTEX-ZTX8-0526-SM-59HLD 62.8
GTEX-ZYFG-2026-SM-5E43Y 62.4
GTEX-14DAR-1426-SM-5RQIR 62.3
GTEX-ZXES-1526-SM-5NQ95 62.0
GTEX-YB5E-1526-SM-5IFIE 61.7
GTEX-11P82-0826-SM-5P9GU 61.6
GTEX-11EQ9-1326-SM-5985X 61.4
GTEX-YEC4-1726-SM-4W21E 61.2
GTEX-ZLV1-1126-SM-4WWBW 61.2
GTEX-13D11-0726-SM-5LZZB 60.3
GTEX-1122O-1326-SM-5H11F 60.1
GTEX-Y5LM-1626-SM-4VDTB 59.8
GTEX-1399U-2126-SM-5IFEZ 59.6
GTEX-ZPCL-1726-SM-57WEO 58.5
GTEX-ZP4G-1626-SM-57WGD 58.2
GTEX-131XG-1726-SM-5LZUR 58.0
GTEX-1399S-2026-SM-5KM4B 57.5
GTEX-11NSD-1726-SM-5N9C3 57.3
GTEX-139YR-2226-SM-5IFFW 57.3
GTEX-11P7K-1626-SM-5GU63 57.3
GTEX-13O61-1326-SM-5KM31 57.0
GTEX-ZVP2-1726-SM-5GU5P 56.9
GTEX-ZTSS-0926-SM-59865 56.8
GTEX-ZA64-1226-SM-5HL7B 56.6
GTEX-XMK1-1826-SM-4B66F 56.6
GTEX-ZVZP-1826-SM-5GZXB 56.4
GTEX-ZYWO-1526-SM-5SIAL 56.2
GTEX-13PL7-2626-SM-5IFH4 55.9
GTEX-131XF-1326-SM-5GCMQ 55.7
GTEX-WRHK-1026-SM-4MVOD 55.7
GTEX-13RTK-0826-SM-5Q5C6 55.3
GTEX-Y9LG-1626-SM-5IFHM 55.2
GTEX-X15G-1426-SM-4PQZK 55.0
GTEX-1192X-2526-SM-59868 54.8
GTEX-111CU-1326-SM-5NQ8L 54.8
GTEX-UPK5-2026-SM-4JBIM 54.4
GTEX-14E6E-1626-SM-5RQI7 54.2
GTEX-WFJO-0926-SM-4LVM2 54.2
GTEX-111YS-1426-SM-5GID8 54.0
GTEX-139T6-1026-SM-5IJGC 53.9
GTEX-11VI4-1626-SM-5EQKO 53.6
GTEX-XBED-1426-SM-4AT4G 53.5
GTEX-ZF2S-1726-SM-57WFT 53.3
GTEX-ZTPG-2626-SM-57WFX 53.1
GTEX-12WSK-1526-SM-5CVNO 53.1
GTEX-1399R-2026-SM-5K7WN 53.0
GTEX-ZPIC-2326-SM-57WDW 52.7
GTEX-ZEX8-1826-SM-57WBH 51.8
GTEX-Z9EW-0926-SM-5CVMM 51.7
GTEX-11DXX-1626-SM-5H11H 51.7
GTEX-13O21-1026-SM-5IJDU 51.6
GTEX-11XUK-1426-SM-5EQMG 51.4
GTEX-XXEK-1026-SM-4BRUW 51.1
GTEX-133LE-1426-SM-5IFH1 51.1
GTEX-Y3IK-1726-SM-4YCCR 50.9
GTEX-13113-1226-SM-5EGHT 50.5
GTEX-145ME-0926-SM-5O9AR 50.4
GTEX-13FH7-1226-SM-5IJFK 50.3
GTEX-12BJ1-1926-SM-5HL9Z 50.1
GTEX-11DXZ-1326-SM-5H11X 50.0
GTEX-13QBU-1926-SM-5IJEW 49.7
GTEX-13111-1426-SM-5DUW3 49.5
GTEX-WFG7-1726-SM-4LVME 49.3
GTEX-117YX-0326-SM-5GICL 49.2
GTEX-XAJ8-0526-SM-47JYK 48.9
GTEX-WEY5-1526-SM-4LMJF 48.9
GTEX-XUZC-1426-SM-4BRV3 48.7
GTEX-ZLFU-1526-SM-4WWBT 48.7
GTEX-X5EB-1626-SM-4E3IV 48.4
GTEX-11I78-1126-SM-5A5K5 48.2
GTEX-Y114-1426-SM-4TT6W 48.1
GTEX-ZQUD-0926-SM-57WE3 47.0
GTEX-ZQG8-2526-SM-57WEQ 46.0
GTEX-WH7G-1626-SM-4LVMY 45.9
GTEX-YF7O-1826-SM-5IFIU 45.8
GTEX-13CF3-1226-SM-5LZXN 44.3
GTEX-VUSG-1726-SM-4KKZL 43.9
GTEX-148VJ-2226-SM-5NQ9M 41.5
GTEX-13OVI-1926-SM-5IJCG 40.6
GTEX-ZC5H-2326-SM-4WAYT 40.2
GTEX-VJYA-0926-SM-4KL1N 39.7
GTEX-WQUQ-2426-SM-4MVNW 38.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

289.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 289.8
FF:10024-101D6 15,40,85 years, mixed 289.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.