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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:119.0TPM
GTEx:36.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody CAB010361

 

Endothelial cells

Low  

Glial cells

Not detected  

Neuronal cells

High  

Neuropil

Low  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

119.0

N/A Male, age 5
Sample 1
TPM: 116.8
overview Female, age 40
Sample 2
TPM: 82.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 157.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

36.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 36.0
Samples: 114

Max RPKM: 51.9
Min RPKM: 15.7
Std RPKM: 7.3
Median RPKM: 37.4
GTEX-13SLX-3126-SM-5S2Q5 51.9
GTEX-14BMV-3026-SM-5S2PQ 49.9
GTEX-WVLH-3026-SM-3MJG9 48.0
GTEX-T5JC-2426-SM-3NMDB 46.9
GTEX-117XS-3026-SM-5N9CA 46.5
GTEX-11DXY-3226-SM-5GIDE 46.2
GTEX-13VXU-2926-SM-5LU5C 46.2
GTEX-13FXS-3126-SM-5J2NN 46.1
GTEX-X585-3026-SM-46MWF 46.0
GTEX-WL46-2926-SM-3LK82 44.6
GTEX-12ZZX-2926-SM-5GCOQ 44.5
GTEX-WZTO-2926-SM-3NM9I 44.4
GTEX-145LS-3126-SM-5Q5BY 44.1
GTEX-14ASI-3026-SM-5S2PN 44.1
GTEX-131YS-3126-SM-5KLYT 43.5
GTEX-13O3O-3126-SM-5KM3H 43.4
GTEX-13FHO-3026-SM-5J1O9 43.2
GTEX-145MG-3026-SM-5RQJA 43.0
GTEX-145MH-3026-SM-5Q5DZ 42.5
GTEX-XLM4-3026-SM-4AT6L 42.5
GTEX-WWYW-3126-SM-3NB39 42.4
GTEX-XOTO-3026-SM-4B65M 42.4
GTEX-ZYFD-3026-SM-5E44C 42.1
GTEX-T6MN-2626-SM-32PMQ 41.9
GTEX-Z93S-2926-SM-57WB9 41.7
GTEX-RNOR-2326-SM-2TF4I 41.4
GTEX-WHSE-3026-SM-3P5ZH 41.3
GTEX-12WSC-3026-SM-5GCNF 41.2
GTEX-11GSO-2926-SM-5HL73 41.1
GTEX-13NYC-2826-SM-5K7WR 41.0
GTEX-ZVT3-3026-SM-5E43N 41.0
GTEX-ZUA1-3026-SM-59HJC 40.9
GTEX-ZAK1-3026-SM-5S2MJ 40.8
GTEX-11WQK-3026-SM-5EQL6 40.6
GTEX-YFC4-3126-SM-5PNV6 40.6
GTEX-12126-1026-SM-5P9JJ 40.4
GTEX-11NUK-2926-SM-5A5MD 40.2
GTEX-13PL6-3126-SM-5LUAR 40.1
GTEX-13OW8-2826-SM-5L3GC 40.0
GTEX-144GL-3026-SM-5Q5CW 40.0
GTEX-11DXW-1126-SM-5H12Q 39.9
GTEX-TSE9-3026-SM-3DB76 39.9
GTEX-YJ89-3026-SM-5IFJI 39.8
GTEX-11ZUS-2926-SM-5FQSL 39.6
GTEX-13QIC-2926-SM-5J2NF 39.6
GTEX-1313W-3126-SM-5LZUI 39.4
GTEX-11ONC-2926-SM-5P9JM 39.3
GTEX-13OVH-3026-SM-5MR4N 38.6
GTEX-13FLW-1426-SM-5K7YE 38.5
GTEX-11PRG-2926-SM-5987A 38.3
GTEX-132Q8-3026-SM-5PNVG 38.3
GTEX-PVOW-2526-SM-2XCF7 38.3
GTEX-QMR6-1426-SM-32PLA 38.3
GTEX-13OW6-3026-SM-5J2MI 38.1
GTEX-Y8DK-0826-SM-4TT3T 38.1
GTEX-13O3Q-2926-SM-5KM45 37.7
GTEX-OXRN-2426-SM-2I5EQ 37.7
GTEX-1399T-3026-SM-5KLZC 37.2
GTEX-12ZZY-3026-SM-5GCOU 37.1
GTEX-13S7M-3126-SM-5RQJQ 36.9
GTEX-X4XX-3026-SM-3NMB2 36.8
GTEX-R55F-1326-SM-5S2V4 36.6
GTEX-RU72-3026-SM-5SI7Y 36.6
GTEX-12ZZZ-3026-SM-5BC67 36.0
GTEX-1128S-2726-SM-5H12C 35.9
GTEX-QVJO-1426-SM-2S1QY 35.9
GTEX-12WSH-3026-SM-5CVNI 35.6
GTEX-13NYS-3126-SM-5KLYV 35.5
GTEX-145MF-2726-SM-5O995 35.5
GTEX-T2IS-3026-SM-32QPM 35.4
GTEX-12ZZW-2926-SM-5LZUP 35.2
GTEX-Y111-2726-SM-4TT3N 35.1
GTEX-11O72-2926-SM-5BC4V 34.5
GTEX-11GS4-3126-SM-5A5LH 34.2
GTEX-14A5I-2926-SM-5Q5CQ 33.9
GTEX-UTHO-3026-SM-3GAFB 33.4
GTEX-13OW7-3026-SM-5L3GY 32.9
GTEX-111FC-3126-SM-5GZZ2 32.6
GTEX-1192X-3126-SM-5N9BY 32.5
GTEX-QDT8-2926-SM-32PKC 32.2
GTEX-13FHP-3026-SM-5IJBS 32.1
GTEX-13NYB-3026-SM-5IJD7 31.8
GTEX-11EMC-3226-SM-5EGKW 31.5
GTEX-13OVJ-2826-SM-5L3GW 31.2
GTEX-11OF3-2926-SM-5HL78 31.1
GTEX-QVUS-2826-SM-3GADB 30.9
GTEX-131XW-3126-SM-5LZUC 30.6
GTEX-13JVG-3126-SM-5L3FH 30.6
GTEX-Q2AG-2926-SM-2HMJ3 30.6
GTEX-11EI6-3026-SM-5GZZO 30.3
GTEX-144FL-3026-SM-5O99C 29.5
GTEX-ZZPT-3026-SM-5GZXH 29.4
GTEX-11OC5-0726-SM-5P9JK 29.3
GTEX-NPJ8-1526-SM-2D7VU 29.3
GTEX-NPJ7-2726-SM-2I3FT 28.9
GTEX-13X6J-3026-SM-5Q5CU 28.7
GTEX-1117F-3226-SM-5N9CT 28.2
GTEX-12WSD-3126-SM-5HL7P 28.2
GTEX-13X6K-2926-SM-5Q5D5 28.2
GTEX-ZE7O-3126-SM-5HL5X 27.7
GTEX-ZAJG-3126-SM-5HL9J 27.6
GTEX-139T8-1026-SM-5J2MC 27.0
GTEX-13PVQ-3026-SM-5SI93 26.5
GTEX-1445S-3026-SM-5O9BR 24.1
GTEX-11TTK-2926-SM-5PNYP 24.0
GTEX-11GSP-3226-SM-5986O 23.8
GTEX-13IVO-2926-SM-5L3CZ 21.7
GTEX-147GR-3026-SM-5S2ML 21.3
GTEX-N7MT-1126-SM-5SI7V 20.9
GTEX-13JUV-2926-SM-5LZX7 20.5
GTEX-13G51-3026-SM-5IJB8 20.1
GTEX-11NV4-2126-SM-5N9DS 19.7
GTEX-PWO3-0926-SM-2I5EY 19.5
GTEX-12WSA-2926-SM-5EQ4D 15.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 37.8
Samples: 108

Max RPKM: 57
Min RPKM: 16.1
Std RPKM: 10
Median RPKM: 39.7
GTEX-13X6K-0011-R10a-SM-5P9JR 57.0
GTEX-13SLX-0011-R10a-SM-5P9HV 53.4
GTEX-13FHO-0011-R10b-SM-5J2MM 53.2
GTEX-13N1W-0011-R10b-SM-5MR4H 53.1
GTEX-12WSE-0011-R10b-SM-5P9JV 52.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 51.8
GTEX-13CZV-0011-R10b-SM-5LZYD 51.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 51.4
GTEX-131XH-0011-R10a-SM-5EGLJ 50.7
GTEX-X585-0011-R10A-SM-46MUY 50.5
GTEX-145MG-0011-R10a-SM-5PNWG 50.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 50.3
GTEX-13S7M-0011-R10b-SM-5PNZB 50.0
GTEX-13O3O-0011-R10a-SM-5LUA9 49.9
GTEX-13OW7-0011-R10a-SM-5L3H3 49.3
GTEX-14BIN-0011-R10a-SM-5S2UA 49.0
GTEX-1313W-0011-R10b-SM-5DUXA 47.8
GTEX-14BIL-0011-R10a-SM-5SI75 47.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 47.4
GTEX-11H98-0011-R10b-SM-5NQ98 47.2
GTEX-145LS-0011-R10a-SM-5PNUQ 47.2
GTEX-YFC4-0011-R10a-SM-4SOK5 46.3
GTEX-13QIC-0011-R10a-SM-5O9C7 46.0
GTEX-12WSF-0011-R10a-SM-5LZVH 45.9
GTEX-12WSC-0011-R10a-SM-5GU57 45.4
GTEX-WZTO-0011-R10B-SM-4E3KB 45.2
GTEX-13QJC-0011-R10a-SM-5SI63 45.0
GTEX-145MH-0011-R10b-SM-5PNUK 45.0
GTEX-NL3H-0011-R10A-SM-2I3E9 44.7
GTEX-WL46-0011-R10A-SM-3MJFQ 44.4
GTEX-13X6J-0011-R10b-SM-5PNWA 44.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 44.1
GTEX-12ZZX-0011-R10b-SM-5DUWK 44.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.9
GTEX-WVLH-0011-R10A-SM-3MJFM 43.9
GTEX-T6MN-0011-R10A-SM-32QP7 43.5
GTEX-13FXS-0011-R10a-SM-5J2MA 43.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 43.3
GTEX-12WSH-0011-R10a-SM-5LZUS 42.7
GTEX-13O3Q-0011-R10b-SM-5KM39 42.5
GTEX-S7SE-0011-R10A-SM-2XCDF 42.4
GTEX-X4XX-0011-R10B-SM-46MWO 42.4
GTEX-131YS-0011-R10b-SM-5EQ5N 42.3
GTEX-X4EP-0011-R10B-SM-4QASJ 42.3
GTEX-QDT8-0011-R10A-SM-32PKG 42.2
GTEX-T5JC-0011-R10A-SM-32PM2 42.1
GTEX-12WSM-0011-R10a-SM-5DUWV 42.0
GTEX-N7MS-0011-R10A-SM-2HMJK 40.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 40.7
GTEX-N7MT-0011-R10A-SM-2I3E1 40.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 40.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 40.5
GTEX-147GR-0011-R10b-SM-5S2UM 39.9
GTEX-13NYS-0011-R10a-SM-5MR4S 39.8
GTEX-XLM4-0011-R10A-SM-4AT5P 39.6
GTEX-13OVL-0011-R10a-SM-5L3GS 39.0
GTEX-13OW6-0011-R10a-SM-5L3HE 38.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 38.5
GTEX-YJ89-0011-R10a-SM-4SOK9 37.6
GTEX-145LU-0011-R10a-SM-5PNWJ 37.5
GTEX-ZF28-0011-R10a-SM-4WWEH 37.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 37.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 36.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 36.9
GTEX-13X6I-0011-R10a-SM-5PNWI 36.7
GTEX-13FLW-0011-R10b-SM-5LZZF 36.5
GTEX-QMR6-0011-R10A-SM-32PKO 36.5
GTEX-147F4-0011-R10b-SM-5S2WC 35.9
GTEX-WWYW-0011-R10A-SM-3NB35 35.6
GTEX-13SLW-0011-R10a-SM-5S2UI 35.1
GTEX-ZVT3-0011-R10b-SM-57WB6 35.0
GTEX-Z93S-0011-R10a-SM-4RGNM 34.9
GTEX-OXRN-0011-R10A-SM-2I5GC 34.6
GTEX-13OW8-0011-R10a-SM-5L3H6 34.5
GTEX-13NYB-0011-R10a-SM-5KM43 34.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 33.2
GTEX-11WQK-0011-R10a-SM-5BC6R 33.1
GTEX-X261-0011-R10B-SM-4E3JT 33.1
GTEX-RVPU-0011-R10A-SM-2XCAH 33.0
GTEX-QVUS-0011-R10A-SM-3GIK3 32.8
GTEX-P44H-0011-R10A-SM-2XCEK 32.7
GTEX-13G51-0011-R10b-SM-5LZYF 32.5
GTEX-13N2G-0011-R10a-SM-5MR34 32.4
GTEX-12126-0011-R10b-SM-5BC6T 31.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 29.2
GTEX-11WQC-0011-R10a-SM-57WCT 28.9
GTEX-TSE9-0011-R10A-SM-3DB7O 28.4
GTEX-ZUA1-0011-R10a-SM-51MT6 27.8
GTEX-13JUV-0011-R10b-SM-5LZXR 26.0
GTEX-13NZA-0011-R10b-SM-5KM54 25.1
GTEX-NL4W-0011-R10A-SM-2I3DY 24.8
GTEX-11ZUS-0011-R10b-SM-5BC79 24.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 23.9
GTEX-12WSD-0011-R10b-SM-5GU79 22.5
GTEX-14753-0011-R10b-SM-5S2WE 21.8
GTEX-ZXG5-0011-R10a-SM-57WDD 21.8
GTEX-139TS-0011-R10a-SM-5K7TU 21.4
GTEX-1445S-0011-R10a-SM-5PNWB 21.4
GTEX-131XW-0011-R10a-SM-5DUVA 21.1
GTEX-1477Z-0011-R10b-SM-5S2RF 20.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 20.6
GTEX-12WSA-0011-R10b-SM-5P9ET 19.9
GTEX-13IVO-0011-R10a-SM-5LZY3 19.6
GTEX-XMD1-0011-R10A-SM-4AT4A 19.4
GTEX-13JVG-0011-R10b-SM-5KM2P 18.7
GTEX-OXRO-0011-R10A-SM-2I5EH 18.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 16.3
GTEX-ZV68-0011-R10a-SM-51MT7 16.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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