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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:86.7TPM
GTEx:61.4RPKM
FANTOM5:253.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA006035

 

Adipocytes

Not detected  

Glandular cells

High  

Myoepithelial cells

High  
 
 
 

BREAST - HPA RNA-seq

Average TPM

86.7

overview Female, age 52
Sample 1
TPM: 65.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 88.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 98.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 95.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

61.4

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 61.4
Samples: 214

Max RPKM: 177.4
Min RPKM: 12.9
Std RPKM: 26.2
Median RPKM: 60.5
GTEX-X4EP-2926-SM-3P5YQ 177.4
GTEX-R3RS-0626-SM-48FE1 167.8
GTEX-11WQK-2426-SM-5GU5C 140.2
GTEX-WI4N-1426-SM-3LK7H 136.3
GTEX-T2IS-1526-SM-32QPR 124.2
GTEX-XOT4-0726-SM-4GIAW 118.5
GTEX-13O3O-0826-SM-5K7WE 117.1
GTEX-SE5C-2126-SM-4BRUJ 114.8
GTEX-Y5LM-1726-SM-4VDSX 106.0
GTEX-13PL6-2926-SM-5L3I2 104.9
GTEX-XUZC-1626-SM-4BRVP 103.3
GTEX-U8XE-0826-SM-4E3J1 98.9
GTEX-ZAJG-0626-SM-5HL8X 98.3
GTEX-ZVT2-1826-SM-5NQ8W 97.9
GTEX-ZLV1-1426-SM-4WWES 97.7
GTEX-WXYG-2226-SM-4E3IM 96.8
GTEX-WYBS-0926-SM-3NM94 96.7
GTEX-VJWN-0726-SM-3GIJ8 95.8
GTEX-11P7K-0726-SM-5EGKX 94.3
GTEX-RU72-0626-SM-46MUI 93.9
GTEX-13NZ9-1026-SM-5MR5K 93.3
GTEX-13OW5-2226-SM-5L3HC 92.9
GTEX-147F4-2826-SM-5NQBN 92.8
GTEX-YJ8O-2226-SM-5IFHW 92.2
GTEX-ZC5H-2626-SM-5J2MG 92.1
GTEX-1399U-1826-SM-5PNZ1 92.0
GTEX-ZF29-1926-SM-5S2P1 91.7
GTEX-11EMC-2026-SM-5A5JV 90.4
GTEX-11WQC-1726-SM-5GU4W 89.6
GTEX-Y5V5-2126-SM-4WWFO 89.4
GTEX-ZF3C-2326-SM-5S2MZ 88.4
GTEX-YFC4-1426-SM-5IFJG 88.1
GTEX-13W3W-1226-SM-5LU4H 87.8
GTEX-QDT8-0626-SM-48TYW 87.7
GTEX-ZXES-0826-SM-5E43C 86.5
GTEX-XMD2-0926-SM-4WWEF 86.2
GTEX-X15G-1626-SM-3NMB3 85.7
GTEX-11TUW-1826-SM-5BC5D 85.2
GTEX-WOFL-0826-SM-3MJG1 84.9
GTEX-13113-1726-SM-5GCOO 84.7
GTEX-RWS6-1926-SM-47JXY 84.2
GTEX-ZY6K-1626-SM-5GZWV 83.6
GTEX-ZV7C-1826-SM-5NQ83 83.0
GTEX-1269C-2426-SM-5FQSN 82.5
GTEX-UJHI-1426-SM-3DB9C 82.4
GTEX-ZU9S-1926-SM-5NQBP 82.3
GTEX-13NZ8-0126-SM-5IJCT 81.9
GTEX-Q2AG-0326-SM-48U1O 80.4
GTEX-TML8-1226-SM-32QON 78.9
GTEX-11GS4-2126-SM-5A5KR 78.1
GTEX-13FTY-2226-SM-5J1ND 77.6
GTEX-144GM-0926-SM-5O994 77.5
GTEX-131YS-0626-SM-5EGKL 76.7
GTEX-S4P3-1326-SM-4AD6V 76.6
GTEX-Y3IK-2326-SM-4WWDT 76.6
GTEX-13O3P-0826-SM-5L3DH 75.6
GTEX-12ZZX-1126-SM-5EGKB 75.5
GTEX-ZZPU-0626-SM-5E43T 75.5
GTEX-WRHU-0326-SM-3MJFY 74.8
GTEX-XUJ4-1926-SM-4BOOV 74.2
GTEX-T5JC-2126-SM-32PMO 74.1
GTEX-SIU7-1626-SM-4BRUK 73.9
GTEX-14AS3-1626-SM-5S2OY 73.0
GTEX-XUW1-2326-SM-4BOO5 72.9
GTEX-X4XY-0926-SM-4E3JD 72.6
GTEX-133LE-1726-SM-5K7VQ 71.9
GTEX-W5X1-2326-SM-3GIL6 71.9
GTEX-ZVT4-1026-SM-57WC4 71.9
GTEX-13O3Q-2226-SM-5KM4O 71.4
GTEX-QVJO-1826-SM-447C9 70.7
GTEX-XYKS-1326-SM-4BRUN 70.1
GTEX-1122O-1226-SM-5H113 68.7
GTEX-13W46-0826-SM-5LU3H 68.1
GTEX-ZEX8-2226-SM-57WC6 68.1
GTEX-11EI6-0626-SM-5985T 67.8
GTEX-13CF2-2026-SM-5K7VI 66.8
GTEX-13QIC-2326-SM-5LU5N 66.7
GTEX-1117F-2826-SM-5GZXL 66.5
GTEX-1313W-0826-SM-5EQ4T 66.5
GTEX-1314G-1226-SM-5BC6D 66.4
GTEX-ZVE2-1226-SM-5NQ8R 66.3
GTEX-ZF2S-2026-SM-5E461 66.2
GTEX-13N1W-0626-SM-5MR4U 65.9
GTEX-QEG5-0726-SM-4R1JQ 65.7
GTEX-11TT1-2126-SM-5GU5Y 65.4
GTEX-T6MO-0326-SM-32QOK 65.4
GTEX-11PRG-0826-SM-5EQ6A 64.9
GTEX-11DXW-0626-SM-5N9ER 64.7
GTEX-S341-1526-SM-4AD6K 64.5
GTEX-131XW-0726-SM-5EGK3 64.1
GTEX-13OW8-0226-SM-5K7UP 63.9
GTEX-12WSK-2226-SM-5GCO5 63.7
GTEX-WYVS-1726-SM-3NMAY 63.3
GTEX-14E6E-1326-SM-5S2NR 62.9
GTEX-VUSG-2226-SM-4KKZO 62.9
GTEX-U3ZN-1926-SM-4DXSG 62.7
GTEX-11EM3-1326-SM-5N9C6 62.6
GTEX-144GL-2026-SM-5LU3O 62.3
GTEX-R55F-1726-SM-2TF4R 62.3
GTEX-13N11-1726-SM-5J1OJ 62.2
GTEX-TMMY-0726-SM-33HBE 61.9
GTEX-RUSQ-2026-SM-4GIAK 61.6
GTEX-XBED-1626-SM-47JYN 61.5
GTEX-T5JW-2026-SM-4DM63 61.4
GTEX-13D11-1026-SM-5IJFB 61.2
GTEX-13S86-1226-SM-5S2OA 61.1
GTEX-13PVQ-1026-SM-5KM3M 61.0
GTEX-XMD1-0826-SM-4AT52 60.0
GTEX-UPK5-2326-SM-3P5Z8 59.8
GTEX-Y8LW-1626-SM-5IFHX 59.3
GTEX-11P81-1926-SM-5BC53 58.9
GTEX-U412-1826-SM-4DXTJ 58.2
GTEX-R53T-1526-SM-48FEK 58.0
GTEX-XV7Q-2326-SM-4BRVZ 57.7
GTEX-ZTTD-1026-SM-51MRD 57.2
GTEX-146FH-0826-SM-5SI8T 57.0
GTEX-Y114-2026-SM-4TT7L 56.3
GTEX-WYJK-1326-SM-3NB2T 56.2
GTEX-1211K-1926-SM-5EQLB 55.5
GTEX-Y111-2026-SM-4SOJA 55.4
GTEX-12WSM-1726-SM-5BC6J 55.3
GTEX-132Q8-1426-SM-5EGK7 54.7
GTEX-11I78-2226-SM-5PNYA 54.6
GTEX-11O72-2126-SM-5N9FO 54.3
GTEX-139T8-0826-SM-5L3DE 53.4
GTEX-TKQ2-1826-SM-33HB2 53.1
GTEX-T2YK-2226-SM-32QPT 51.0
GTEX-12WSB-0626-SM-59HJO 50.7
GTEX-ZYW4-0826-SM-5GIDG 50.5
GTEX-ZYWO-2326-SM-5GZY4 50.0
GTEX-Y3I4-1526-SM-4TT7K 49.9
GTEX-ZTX8-1226-SM-4YCE9 49.5
GTEX-U3ZH-1426-SM-4DXSR 49.2
GTEX-13NZB-2126-SM-5MR4Y 48.5
GTEX-11OF3-1926-SM-59889 48.0
GTEX-S4UY-0726-SM-4AD6X 48.0
GTEX-ZPIC-1126-SM-5BC7F 47.8
GTEX-11EQ9-1826-SM-5Q5AJ 47.6
GTEX-ZVZQ-0826-SM-51MRF 47.1
GTEX-S7SE-0826-SM-4AT4D 46.6
GTEX-ZDXO-0126-SM-5S2ND 46.5
GTEX-Y8E4-1626-SM-5S2MW 46.4
GTEX-11NV4-2026-SM-5N9DG 46.3
GTEX-132AR-0826-SM-5EGK6 46.0
GTEX-11LCK-2426-SM-5HL5F 45.7
GTEX-145LT-0726-SM-5S2VM 45.1
GTEX-145MN-1926-SM-5SIAI 44.9
GTEX-S33H-0326-SM-4AD6N 44.7
GTEX-YB5K-1626-SM-5IFIN 44.7
GTEX-ZV6S-1826-SM-5NQ8D 44.7
GTEX-1192X-2326-SM-5987X 44.4
GTEX-14753-2426-SM-5LU8U 44.2
GTEX-T6MN-0726-SM-32PML 44.0
GTEX-X261-0626-SM-3NMD9 43.0
GTEX-111YS-1926-SM-5GICC 42.9
GTEX-S32W-2026-SM-4AD6E 42.9
GTEX-ZYFC-0826-SM-5E44K 42.6
GTEX-11ONC-2126-SM-5HL6E 42.4
GTEX-139TU-0626-SM-5KM3X 42.3
GTEX-YEC3-1026-SM-5IFI5 42.1
GTEX-132NY-0826-SM-5K7Y7 42.0
GTEX-12WSN-1326-SM-5GCNT 41.3
GTEX-117XS-1926-SM-5GICO 41.2
GTEX-13FTX-1126-SM-5N9EN 41.0
GTEX-ZUA1-1526-SM-59HLS 40.8
GTEX-ZWKS-2826-SM-5NQ74 40.8
GTEX-12BJ1-1826-SM-5HL9N 40.5
GTEX-14ABY-2126-SM-5QGQZ 39.5
GTEX-WY7C-2726-SM-3NB3P 39.1
GTEX-13CF3-2126-SM-5IFJP 38.2
GTEX-11P82-1326-SM-5HL62 37.9
GTEX-ZZ64-1226-SM-5E43R 37.9
GTEX-13FHO-0826-SM-5L3E8 37.8
GTEX-QMRM-1626-SM-4R1KV 36.9
GTEX-R55D-0826-SM-48FEA 36.1
GTEX-145ME-1526-SM-5Q5F2 35.9
GTEX-145MO-0826-SM-5NQBL 35.8
GTEX-11DXY-2326-SM-5GICW 35.7
GTEX-QEL4-2126-SM-447AE 35.2
GTEX-ZVTK-0326-SM-51MRR 35.2
GTEX-11DZ1-0326-SM-5N9BN 34.7
GTEX-ZDTT-2126-SM-5S2OJ 34.5
GTEX-YB5E-1726-SM-5IFJ3 34.2
GTEX-REY6-2426-SM-48FF5 33.8
GTEX-XGQ4-0926-SM-4AT4U 32.7
GTEX-13FTW-1426-SM-5LZWZ 32.1
GTEX-ZDYS-1126-SM-5K7UB 32.1
GTEX-11ZUS-0826-SM-5FQUY 31.4
GTEX-117YX-1426-SM-5H12H 30.9
GTEX-S4Q7-1126-SM-4AD6R 30.6
GTEX-ZAB4-2526-SM-5HL8M 30.6
GTEX-ZQUD-1926-SM-51MSA 30.5
GTEX-11GSO-1926-SM-5A5K3 30.2
GTEX-11NSD-0926-SM-5N9DR 30.2
GTEX-Y5V6-2126-SM-4WWFX 29.8
GTEX-Y9LG-1426-SM-5IFJZ 29.4
GTEX-13O61-1826-SM-5KM4I 29.1
GTEX-YFCO-1826-SM-4W1YH 28.7
GTEX-11ZTT-2326-SM-5EQLG 28.6
GTEX-XQ8I-2426-SM-4WAXY 28.5
GTEX-XQ3S-1326-SM-4BOPQ 28.1
GTEX-ZT9W-2026-SM-51MRA 27.5
GTEX-12KS4-0126-SM-5Q5A5 27.3
GTEX-TKQ1-0226-SM-33HB5 27.3
GTEX-ZLFU-2126-SM-4WWEV 26.8
GTEX-ZQG8-0726-SM-5P9H9 26.7
GTEX-WFON-1826-SM-3GILG 26.0
GTEX-XMK1-1126-SM-4IHJ8 25.4
GTEX-139T6-1626-SM-5PNYZ 25.2
GTEX-ZYT6-0126-SM-5E45J 24.8
GTEX-11DXZ-1926-SM-5GZZL 24.0
GTEX-ZA64-1526-SM-5CVMD 23.6
GTEX-PSDG-1626-SM-48TCQ 19.3
GTEX-UTHO-1026-SM-3GAF7 12.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

253.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 253.8
FF:10080-102A8 77 years, female 253.8

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