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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:24.0RPKM
FANTOM5:277.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
 

Antibody staining

Antibody HPA006035

 

Glial cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

24.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 24.0
Samples: 117

Max RPKM: 68.4
Min RPKM: 3.2
Std RPKM: 12.2
Median RPKM: 25
GTEX-WHSE-0011-R5A-SM-3P5ZO 68.4
GTEX-X585-0011-R5A-SM-46MVI 49.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 46.9
GTEX-13G51-0011-R5a-SM-5L3EB 45.7
GTEX-131YS-0011-R5b-SM-5K7YB 45.3
GTEX-14BIM-0011-R5b-SM-5S2RM 43.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 43.7
GTEX-WWYW-0011-R5A-SM-3NB3E 43.1
GTEX-QVJO-0011-R5A-SM-2S1QM 41.5
GTEX-1399T-0011-R5b-SM-5IJDK 40.5
GTEX-12WSF-0011-R5a-SM-5HL8K 39.8
GTEX-13JUV-0011-R5a-SM-5LZY5 39.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 38.8
GTEX-12WSC-0011-R5b-SM-5CVNS 38.2
GTEX-132Q8-0011-R5a-SM-5IJDM 37.0
GTEX-UTHO-0011-R5A-SM-3GIJD 37.0
GTEX-145MH-0011-R5a-SM-5P9JT 36.8
GTEX-1313W-0011-R5b-SM-5L3EP 36.4
GTEX-145LS-0011-R5a-SM-5SI65 36.2
GTEX-N7MT-0011-R5a-SM-2I3G6 36.2
GTEX-13SLX-0011-R5a-SM-5O9BV 35.5
GTEX-T5JC-0011-R5A-SM-32PLK 35.5
GTEX-13NYS-0011-R5a-SM-5MR4D 34.8
GTEX-T2IS-0011-R5A-SM-32QP4 34.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 33.8
GTEX-13O3O-0011-R5b-SM-5KM44 33.0
GTEX-RU72-0011-R5A-SM-2TF6U 33.0
GTEX-11GSP-0011-R5a-SM-57WBE 32.7
GTEX-N7MS-0011-R5a-SM-2HMK8 32.5
GTEX-13VXU-0011-R5a-SM-5O9D7 32.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 32.3
GTEX-T6MN-0011-R5A-SM-32QPD 32.1
GTEX-WVLH-0011-R5A-SM-3MJFW 32.1
GTEX-WL46-0011-R5A-SM-3LK6V 31.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 30.9
GTEX-13OW5-0011-R5b-SM-5L3FR 30.6
GTEX-P44H-0011-R5A-SM-2XCEX 30.6
GTEX-13X6I-0011-R5a-SM-5PNWW 30.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 30.1
GTEX-13X6J-0011-R5b-SM-5PNWT 29.2
GTEX-13FXS-0011-R5b-SM-5LZYE 29.1
GTEX-PVOW-0011-R5A-SM-32PL7 28.7
GTEX-WZTO-0011-R5B-SM-3NMC5 28.7
GTEX-OHPN-0011-R5A-SM-2I5FF 28.6
GTEX-13FLW-0011-R5a-SM-5LZX6 28.5
GTEX-S7SE-0011-R5A-SM-2XCDA 28.3
GTEX-ZUA1-0011-R5b-SM-51MTG 28.0
GTEX-13X6K-0011-R5b-SM-5PNUE 27.7
GTEX-14ABY-0011-R5b-SM-5SI7B 27.6
GTEX-13S7M-0011-R5b-SM-5P9HS 27.5
GTEX-13OVL-0011-R5b-SM-5L3FU 27.4
GTEX-11OF3-0011-R5a-SM-57WB4 26.7
GTEX-RVPU-0011-R5A-SM-2XCAD 26.7
GTEX-TSE9-0011-R5A-SM-3DB7J 26.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 26.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 26.1
GTEX-13CZV-0011-R5a-SM-5K7XA 25.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 25.0
GTEX-Z93S-0011-R5b-SM-4RGNI 25.0
GTEX-NL4W-0011-R5a-SM-2I3GD 24.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 24.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 24.0
GTEX-RVPV-0011-R5A-SM-2TF69 23.9
GTEX-R55E-0011-R5A-SM-2TC5N 23.4
GTEX-13OVH-0011-R5b-SM-5KM4L 23.2
GTEX-13OW6-0011-R5a-SM-5O9BK 23.0
GTEX-13OW7-0011-R5b-SM-5O9DM 21.9
GTEX-XMD1-0011-R5A-SM-4AT47 21.6
GTEX-11NV4-0011-R5a-SM-5NQ88 21.5
GTEX-ZE7O-0011-R5a-SM-57WBO 20.3
GTEX-12WSD-0011-R5b-SM-5CVNG 19.9
GTEX-11H98-0011-R5b-SM-57WCF 19.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 18.9
GTEX-13NYB-0011-R5a-SM-5MR45 18.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 18.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 17.7
GTEX-NL3H-0011-R5a-SM-2I3GB 17.0
GTEX-ZXG5-0011-R5b-SM-57WBN 16.9
GTEX-14BIN-0011-R5b-SM-5SI78 16.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 16.8
GTEX-12WSB-0011-R5b-SM-5GU67 15.5
GTEX-XOTO-0011-R5A-SM-4B657 15.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 15.3
GTEX-13FLV-0011-R5a-SM-5LZWT 15.2
GTEX-139TT-0011-R5b-SM-5K7W8 15.0
GTEX-OXRN-0011-R5A-SM-2I5EF 14.4
GTEX-YFC4-0011-R5a-SM-4RGLR 13.9
GTEX-X261-0011-R5A-SM-3NMB4 13.3
GTEX-13CIG-0011-R5b-SM-5L3F2 13.2
GTEX-13JVG-0011-R5a-SM-5MR4O 13.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 13.1
GTEX-12ZZX-0011-R5a-SM-5HL89 13.0
GTEX-144GO-0011-R5a-SM-5PNUR 13.0
GTEX-X4XX-0011-R5A-SM-46MWN 12.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 12.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 12.4
GTEX-QMR6-0011-R5A-SM-32PKT 10.4
GTEX-YJ89-0011-R5a-SM-4V6GM 10.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 9.4
GTEX-144GL-0011-R5b-SM-5PNUJ 9.3
GTEX-139TS-0011-R5b-SM-5J2MZ 8.9
GTEX-11WQC-0011-R5a-SM-5BC74 8.7
GTEX-ZV68-0011-R5a-SM-4YCDW 8.3
GTEX-13112-0011-R5b-SM-5DUV8 8.2
GTEX-ZVT3-0011-R5a-SM-51MSI 7.6
GTEX-13FHP-0011-R5b-SM-5LZY2 7.4
GTEX-NPJ7-0011-R5a-SM-33HBK 7.4
GTEX-1477Z-0011-R5b-SM-5PNUO 6.9
GTEX-1445S-0011-R5a-SM-5PNUS 6.1
GTEX-139T8-0011-R5b-SM-5J1MO 5.8
GTEX-S7PM-0011-R5A-SM-3NM8G 5.6
GTEX-12WSA-0011-R5b-SM-5GU5I 5.2
GTEX-13NZA-0011-R5b-SM-5KM4K 5.2
GTEX-11UD1-0011-R5b-SM-5P9FP 4.7
GTEX-12WSH-0011-R5b-SM-5P9F3 4.5
GTEX-13CF2-0011-R5a-SM-5LZWS 4.5
GTEX-145MG-0011-R5b-SM-5S2VU 3.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

277.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 277.5
FF:10164-103B2 76 years, female 297.6
FF:10379-105H1 89 years, female 257.5

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