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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.8RPKM
FANTOM5:127.0Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA006035

 

Glial cells

Low  

Neuronal cells

High  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 9.8
Samples: 94

Max RPKM: 30.2
Min RPKM: 1.9
Std RPKM: 5.5
Median RPKM: 8.7
GTEX-13OW5-0011-R1b-SM-5L3GE 30.2
GTEX-13JUV-0011-R1a-SM-5LZY4 25.0
GTEX-13NYS-0011-R1b-SM-5MR55 24.1
GTEX-13N1W-0011-R1b-SM-5MR4T 23.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 22.7
GTEX-WWYW-0011-R1A-SM-3TW8G 22.7
GTEX-X585-0011-R1B-SM-46MVE 19.4
GTEX-131XH-0011-R1a-SM-5DUWA 19.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 19.1
GTEX-T5JC-0011-R1A-SM-32PM6 16.5
GTEX-145MH-0011-R1b-SM-5PNWY 16.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 14.8
GTEX-13X6I-0011-R1b-SM-5PNZC 14.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 14.6
GTEX-RNOR-0011-R1A-SM-5SI8F 14.3
GTEX-13O3O-0011-R1b-SM-5KM2K 14.2
GTEX-PVOW-0011-R1A-SM-32PL6 13.7
GTEX-12WSE-0011-R1b-SM-5GU4V 13.6
GTEX-S7SE-0011-R1A-SM-2XCDE 13.6
GTEX-NPJ7-0011-R1a-SM-3GACT 13.3
GTEX-WL46-0011-R1A-SM-3LK6M 13.3
GTEX-13OW7-0011-R1b-SM-5L3HF 13.2
GTEX-13FXS-0011-R1a-SM-5K7U6 12.7
GTEX-QVJO-0011-R1A-SM-2S1QI 12.6
GTEX-11ONC-0011-R1a-SM-57WD4 12.5
GTEX-R55E-0011-R1A-SM-2TC6N 12.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 11.7
GTEX-TSE9-0011-R1A-SM-3DB7E 11.6
GTEX-12WSF-0011-R1a-SM-5DUVI 11.5
GTEX-12WSD-0011-R1b-SM-5LZVY 11.3
GTEX-13G51-0011-R1a-SM-5LZYR 11.1
GTEX-139TT-0011-R1a-SM-5LZVD 10.9
GTEX-13FLW-0011-R1b-SM-5LZX2 10.6
GTEX-N7MT-0011-R1a-SM-5SI7S 10.4
GTEX-131YS-0011-R1a-SM-5DUXC 10.4
GTEX-YFC4-0011-R1a-SM-4V6EH 10.1
GTEX-X4XX-0011-R1B-SM-3P622 10.1
GTEX-139T8-0011-R1a-SM-5HL75 10.1
GTEX-N7MS-0011-R1a-SM-2HMJG 10.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 9.5
GTEX-P44H-0011-R1A-SM-3NM8J 9.4
GTEX-14ASI-0011-R1b-SM-5S2TY 9.3
GTEX-WVLH-0011-R1A-SM-4MVOK 9.3
GTEX-13PDP-0011-R1a-SM-5PNX5 9.0
GTEX-144GL-0011-R1a-SM-5PNZ5 9.0
GTEX-QVUS-0011-R1A-SM-3GAD2 8.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 8.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 8.6
GTEX-13SLW-0011-R1a-SM-5S2W7 8.5
GTEX-12WSM-0011-R1a-SM-5LZW6 8.4
GTEX-13NYB-0011-R1b-SM-5KM4F 8.4
GTEX-13N2G-0011-R1b-SM-5MR3G 8.3
GTEX-132Q8-0011-R1a-SM-5EGLK 8.0
GTEX-UTHO-0011-R1A-SM-3GIJO 8.0
GTEX-XOTO-0011-R1B-SM-4B65C 8.0
GTEX-13OW8-0011-R1a-SM-5L3HI 7.7
GTEX-NL3H-0011-R1a-SM-48TDJ 7.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 7.3
GTEX-12WSH-0011-R1a-SM-5GU5V 7.1
GTEX-QDT8-0011-R1A-SM-32PKS 6.8
GTEX-T6MN-0011-R1A-SM-32QOY 6.7
GTEX-NPJ8-0011-R1a-SM-33HCB 6.6
GTEX-1399T-0011-R1b-SM-5DUWN 6.6
GTEX-1313W-0011-R1b-SM-5EQ4A 6.4
GTEX-13S7M-0011-R1b-SM-5PNZE 6.3
GTEX-13FHO-0011-R1b-SM-5KLZG 6.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 6.1
GTEX-13112-0011-R1b-SM-5HL7K 6.0
GTEX-11UD1-0011-R1b-SM-5BC7D 6.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 6.0
GTEX-PWO3-0011-R1A-SM-2I5EW 5.8
GTEX-WZTO-0011-R1B-SM-3NMAR 5.8
GTEX-145LS-0011-R1b-SM-5PNUP 5.6
GTEX-13JVG-0011-R1a-SM-5KM32 5.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 5.0
GTEX-YJ89-0011-R1a-SM-4RGLS 4.9
GTEX-QMR6-0011-R1A-SM-32PKW 4.9
GTEX-144GO-0011-R1a-SM-5PNWO 4.8
GTEX-1212Z-0011-R1b-SM-5BC72 4.8
GTEX-13QJC-0011-R1b-SM-5S2UU 4.8
GTEX-XMD1-0011-R1A-SM-4AT4C 4.8
GTEX-11GSO-0011-R1b-SM-57WD3 4.6
GTEX-13OVL-0011-R1a-SM-5L3H5 3.9
GTEX-ZF28-0011-R1a-SM-4WWD1 3.8
GTEX-13NZA-0011-R1b-SM-5LUAF 3.7
GTEX-145LU-0011-R1a-SM-5Q5CE 3.6
GTEX-13CF2-0011-R1a-SM-5LZY1 3.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 3.6
GTEX-13FTY-0011-R1a-SM-5LZXE 3.4
GTEX-12WSB-0011-R1b-SM-5P9EY 3.2
GTEX-11ZTS-0011-R1a-SM-5BC71 2.9
GTEX-13FHP-0011-R1b-SM-5K7XL 2.9
GTEX-ZE7O-0011-R1a-SM-57WDM 2.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 1.9
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

127.0

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 127.0
FF:10169-103B7 60 years, female 134.3
FF:10153-102I9 76 years, female 131.8
FF:10374-105G5 89 years, female 115.0

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