We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ACTN1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:77.8TPM
GTEx:24.7RPKM
FANTOM5:163.4Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:High
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA006035

 

Cells in red pulp

High  

Cells in white pulp

Medium  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

77.8

overview Female, age 60
Sample 1
TPM: 96.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 93.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 68.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 50.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 79.4
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

24.7

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 24.7
Samples: 104

Max RPKM: 46.4
Min RPKM: 12
Std RPKM: 8.1
Median RPKM: 22.9
GTEX-O5YT-0926-SM-48TDG 46.4
GTEX-POMQ-0126-SM-48TD6 45.4
GTEX-ZLWG-0426-SM-4WWFA 44.1
GTEX-ZZPU-0126-SM-5E446 42.8
GTEX-XPVG-0626-SM-4B65B 41.8
GTEX-QMRM-0226-SM-4R1K7 41.1
GTEX-U3ZN-0126-SM-4DXUM 39.2
GTEX-UJHI-0126-SM-4IHLP 38.7
GTEX-139YR-0426-SM-5IFFV 38.6
GTEX-YB5E-0426-SM-5IFHR 37.9
GTEX-Q2AH-0226-SM-48U1I 37.2
GTEX-ZAB5-0526-SM-5CVMU 37.2
GTEX-12WSG-0926-SM-5EGIH 36.3
GTEX-QDVN-0526-SM-48TZ4 35.4
GTEX-11EQ9-0426-SM-5A5JY 34.3
GTEX-145MN-0126-SM-5RQHY 33.2
GTEX-XMK1-0126-SM-4B65F 33.2
GTEX-11P81-1326-SM-5GU5S 32.9
GTEX-QLQW-0126-SM-447BK 32.6
GTEX-ZP4G-0326-SM-4YCEF 32.4
GTEX-132QS-0226-SM-5IFFZ 32.0
GTEX-13111-0126-SM-5EGHO 31.6
GTEX-XAJ8-0126-SM-47JYG 31.2
GTEX-RUSQ-0126-SM-47JWV 30.2
GTEX-ZV6S-0826-SM-5NQ6Z 30.0
GTEX-YB5K-1926-SM-4VDT4 29.9
GTEX-11P7K-0426-SM-5BC5H 29.5
GTEX-VJYA-0126-SM-4KL1P 28.7
GTEX-13S86-0126-SM-5S2PI 28.3
GTEX-ZYFG-0726-SM-5GIDX 27.8
GTEX-Q734-0226-SM-48U1A 27.2
GTEX-ZVP2-0526-SM-51MSC 26.6
GTEX-YFCO-0926-SM-5LUA5 26.4
GTEX-ZPU1-1026-SM-4YCEQ 26.3
GTEX-131XG-0426-SM-5IFGD 26.2
GTEX-146FQ-0626-SM-5LU9U 25.8
GTEX-WFON-0126-SM-4LVM9 25.8
GTEX-WHWD-0126-SM-4OORS 25.7
GTEX-T5JW-0126-SM-4DM6K 25.2
GTEX-P4PP-0926-SM-48TBZ 25.0
GTEX-QCQG-0226-SM-48U28 24.8
GTEX-X4LF-0226-SM-4QAS8 24.7
GTEX-PW2O-0126-SM-48TC8 24.6
GTEX-13X6H-0726-SM-5Q5BX 24.3
GTEX-S4Z8-0226-SM-4AD5K 24.3
GTEX-11VI4-0126-SM-5GU6Z 24.2
GTEX-131XE-1126-SM-5EGHW 24.1
GTEX-XV7Q-0126-SM-4BRVK 23.9
GTEX-Y5LM-0326-SM-4VBRN 23.9
GTEX-1122O-0526-SM-5N9DM 23.8
GTEX-W5WG-0626-SM-4SOID 23.0
GTEX-146FR-1926-SM-5NQA6 22.9
GTEX-OIZH-0926-SM-48TBR 22.9
GTEX-P4QS-0926-SM-48TBS 22.8
GTEX-PLZ6-0126-SM-48TC6 22.7
GTEX-1399S-0226-SM-5IFFG 22.6
GTEX-QV31-0126-SM-447BP 22.1
GTEX-Z9EW-0726-SM-5HL9H 22.1
GTEX-X585-1826-SM-4QAS3 22.0
GTEX-XUJ4-0226-SM-4BOP8 22.0
GTEX-ZYWO-0226-SM-5GZX3 21.9
GTEX-U4B1-0526-SM-4DXTK 21.7
GTEX-144GN-2126-SM-5O99D 21.5
GTEX-Y114-0726-SM-4TT6U 21.4
GTEX-XXEK-0126-SM-4BRVU 21.1
GTEX-12WSN-0126-SM-5DUX5 21.0
GTEX-13CF3-0226-SM-5J1NW 21.0
GTEX-OOBJ-0926-SM-48TDO 20.9
GTEX-12WSJ-0526-SM-5GCOZ 20.8
GTEX-PX3G-0926-SM-48U12 20.6
GTEX-ZLFU-0526-SM-4WWBN 20.6
GTEX-ZVZP-0726-SM-59HKA 20.6
GTEX-11LCK-0126-SM-5A5M5 20.3
GTEX-147F3-0126-SM-5NQBJ 19.9
GTEX-13PL7-1126-SM-5MR5O 19.8
GTEX-Y3I4-0126-SM-4TT26 19.4
GTEX-117YX-2126-SM-5GIEL 19.3
GTEX-YEC4-0126-SM-4W21T 19.3
GTEX-QV44-0126-SM-4R1KH 18.9
GTEX-Y8LW-0126-SM-4VBS1 18.7
GTEX-Y3IK-0126-SM-4WWE9 18.3
GTEX-S3XE-0626-SM-4AD6B 18.2
GTEX-14E6E-1226-SM-5S2R5 17.8
GTEX-ZDTT-1026-SM-5KM19 17.7
GTEX-14DAR-0326-SM-5S2PS 17.3
GTEX-12BJ1-0726-SM-5EGGF 17.0
GTEX-UPK5-1626-SM-4JBHI 16.9
GTEX-R55G-0226-SM-48FEI 16.2
GTEX-13FH7-1326-SM-5IFG8 16.1
GTEX-139T6-0226-SM-5IFGZ 16.0
GTEX-1399R-0226-SM-5IJGG 15.8
GTEX-X3Y1-0126-SM-4PQZA 15.3
GTEX-13PVR-0326-SM-5RQJY 15.2
GTEX-11DXX-0726-SM-5H12X 15.0
GTEX-13U4I-1626-SM-5IFFR 15.0
GTEX-13VXT-1326-SM-5LU3Y 14.5
GTEX-11NSD-0426-SM-5N9CR 14.3
GTEX-XGQ4-0126-SM-4AT4H 14.0
GTEX-U3ZH-0126-SM-4DXUK 13.9
GTEX-13N11-0126-SM-5KM2Z 13.8
GTEX-1211K-0426-SM-5FQTP 13.3
GTEX-11XUK-0426-SM-5EQML 12.6
GTEX-XQ8I-1726-SM-4BOQB 12.5
GTEX-12WSK-0126-SM-5GCO7 12.0
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

163.4

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 163.4
FF:10025-101D7 39,50,70 years, male 163.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.