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LIMS2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:60.2TPM
GTEx:36.6RPKM
FANTOM5:44.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA058340

  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA058340

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

60.2
N/A Female, age 80
Sample 1
TPM: 72.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 77.5
N/A Female, age 57
Sample 3
TPM: 69.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 53.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 28.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

36.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 37.9
Samples: 350

Max RPKM: 98.9
Min RPKM: 11
Std RPKM: 13.8
Median RPKM: 36.7
GTEX-13111-1726-SM-5EGJZ 98.9
GTEX-13OW6-0526-SM-5L3HY 92.2
GTEX-RTLS-0226-SM-2TF5E 84.3
GTEX-14C5O-0226-SM-5SI6O 83.3
GTEX-11WQC-2426-SM-5EQKQ 78.3
GTEX-13W3W-2526-SM-5SI9P 78.1
GTEX-UTHO-0426-SM-5SI7N 70.6
GTEX-OOBJ-0226-SM-2YUMM 69.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 34.5
Samples: 227

Max RPKM: 101.5
Min RPKM: 9.3
Std RPKM: 16.5
Median RPKM: 30
GTEX-ZE7O-1526-SM-5J1NH 101.5
GTEX-ZXG5-1626-SM-59HJK 97.1
GTEX-WL46-2026-SM-3LK7U 85.2
GTEX-X585-2526-SM-4QAS1 77.7
GTEX-11VI4-1226-SM-5EQMP 75.5
GTEX-XQ8I-1426-SM-4BOPW 75.5
GTEX-14A6H-1026-SM-5SIAZ 74.1
GTEX-13VXU-1026-SM-5KLZE 71.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

44.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 44.5
FF:10010-101C1 65,65,76 years, mixed 44.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.