Tissue expression of LIMS2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	44.4	TPM
GTEx:	11.2	RPKM
FANTOM5:	94.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA058340
Squamous epithelial cells	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	44.4

Female, age 70

Sample 1
TPM: 32.3

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 57.4

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 43.5

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	11.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 11.2

Samples: 286

Max RPKM: 39.7
Min RPKM: 2.3
Std RPKM: 6
Median RPKM: 9.5

GTEX-WEY5-0926-SM-4LMI4

39.7

GTEX-11VI4-0526-SM-5EQ48

37.8

GTEX-XMD2-1326-SM-4YCET

33.1

GTEX-ZYW4-1326-SM-5E45N

31.1

GTEX-RTLS-1126-SM-46MUQ

30.4

GTEX-ZZPT-1426-SM-5N9C5

30.4

GTEX-R45C-1226-SM-48FEE

30.3

GTEX-14DAQ-1426-SM-5RQJD

28.3

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	94.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 94.3

FF:10015-101C6

68,74,75 years, mixed

94.3