Tissue expression of LIMS2 - Staining in heart muscle

HEART MUSCLE - Expression summary

Protein expression

RNA expression

HPA:	65.6	TPM
GTEx:	49.7	RPKM
FANTOM5:	70.0	Tags Per Million

HEART MUSCLE - Annotated protein expression

Annotated protein
expression

Myocytes:

Low

Antibody staining	Antibody HPA058340
Myocytes	Low

HEART MUSCLE - HPA RNA-seq

Average TPM	65.6

Female, age 48

Sample 1
TPM: 57.2

Cell types%

Myocytes: 15
Fibroblasts: 55
Endothelial cells: 25
Other cell types: 5

Female, age 42

Sample 2
TPM: 87.1

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

Male, age 53

Sample 3
TPM: 45.1

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

Female, age 69

Sample 4
TPM: 66.0

Cell types%

Myocytes: 20
Fibroblasts: 45
Endothelial cells: 30
Other cell types: 5

HEART MUSCLE - GTEx RNA-seq

Average RPKM	49.7

GTEx sample id

RPKM

Heart - Atrial Appendage

Heart - Atrial Appendage
RPKM: 48.3

Samples: 194

Max RPKM: 90.7
Min RPKM: 20.9
Std RPKM: 12.9
Median RPKM: 45.9

GTEX-ZZPT-0926-SM-5GICZ

90.7

GTEX-13PL6-0826-SM-5IJBI

83.2

GTEX-13NYS-1926-SM-5IJCB

82.6

GTEX-YFC4-0426-SM-4TT3J

81.4

GTEX-XOT4-1126-SM-4B66E

79.6

GTEX-Y5V5-0726-SM-4VBPY

76.5

GTEX-ZAK1-1126-SM-5PNXU

76.4

GTEX-132NY-1426-SM-5J1MJ

73.5

Show all

Heart - Left Ventricle

Heart - Left Ventricle
RPKM: 50.9

Samples: 218

Max RPKM: 98.3
Min RPKM: 17.3
Std RPKM: 14.3
Median RPKM: 49.6

GTEX-WI4N-0626-SM-3TW8Z

98.3

GTEX-P44H-0726-SM-48TBT

92.9

GTEX-RTLS-0826-SM-2TF5Q

92.9

GTEX-13NZB-0226-SM-5KM1T

92.4

GTEX-Y5V5-0626-SM-4VBPX

91.8

GTEX-OXRL-0326-SM-2I3F2

87.5

GTEX-ZYW4-0926-SM-59HJS

86.4

GTEX-UJHI-0426-SM-3DB8Y

81.9

Show all

HEART MUSCLE - FANTOM5 CAGE

Average Tags Per Million	70.0

FANTOM5 sample id

Sample description

Tags Per Million

Heart
Tags Per Million: 81.8

FF:10016-101C7

70,73,74 years, mixed

81.8

Left ventricle
Tags Per Million: 58.1

FF:10078-102A6

73 years, female

58.1