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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:164.9TPM
GTEx:61.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Medium
Neuropil:High
 

Antibody staining

Antibody HPA042122

 

Antibody HPA042770

 

Endothelial cells

Not detected   Low  

Glial cells

Low   Not detected  

Neuronal cells

Medium   Low  

Neuropil

High   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

164.9

N/A Male, age 5
Sample 1
TPM: 221.4
overview Female, age 40
Sample 2
TPM: 78.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 195.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

61.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 60.3
Samples: 114

Max RPKM: 92.5
Min RPKM: 28.8
Std RPKM: 15
Median RPKM: 59
GTEX-PVOW-2526-SM-2XCF7 92.5
GTEX-T5JC-2426-SM-3NMDB 91.9
GTEX-T2IS-3026-SM-32QPM 91.5
GTEX-12ZZX-2926-SM-5GCOQ 86.7
GTEX-12126-1026-SM-5P9JJ 85.0
GTEX-WZTO-2926-SM-3NM9I 84.4
GTEX-WVLH-3026-SM-3MJG9 82.9
GTEX-Z93S-2926-SM-57WB9 82.6
GTEX-WWYW-3126-SM-3NB39 81.6
GTEX-WL46-2926-SM-3LK82 81.4
GTEX-11PRG-2926-SM-5987A 80.6
GTEX-ZUA1-3026-SM-59HJC 78.6
GTEX-X4XX-3026-SM-3NMB2 77.9
GTEX-13O3Q-2926-SM-5KM45 77.3
GTEX-14BMV-3026-SM-5S2PQ 76.8
GTEX-11ZUS-2926-SM-5FQSL 76.5
GTEX-13OW6-3026-SM-5J2MI 76.3
GTEX-12WSC-3026-SM-5GCNF 76.2
GTEX-145MF-2726-SM-5O995 76.2
GTEX-RNOR-2326-SM-2TF4I 75.9
GTEX-145MH-3026-SM-5Q5DZ 75.7
GTEX-YFC4-3126-SM-5PNV6 75.5
GTEX-R55F-1326-SM-5S2V4 74.9
GTEX-131YS-3126-SM-5KLYT 74.4
GTEX-14ASI-3026-SM-5S2PN 74.4
GTEX-WHSE-3026-SM-3P5ZH 73.7
GTEX-13NYC-2826-SM-5K7WR 73.6
GTEX-1313W-3126-SM-5LZUI 72.9
GTEX-13FXS-3126-SM-5J2NN 72.7
GTEX-Q2AG-2926-SM-2HMJ3 72.6
GTEX-T6MN-2626-SM-32PMQ 71.6
GTEX-QVJO-1426-SM-2S1QY 71.5
GTEX-13NYB-3026-SM-5IJD7 71.4
GTEX-X585-3026-SM-46MWF 70.5
GTEX-ZYFD-3026-SM-5E44C 69.9
GTEX-11NUK-2926-SM-5A5MD 69.1
GTEX-11DXW-1126-SM-5H12Q 68.7
GTEX-ZAK1-3026-SM-5S2MJ 68.6
GTEX-13VXU-2926-SM-5LU5C 67.5
GTEX-13FHP-3026-SM-5IJBS 67.3
GTEX-Y111-2726-SM-4TT3N 66.9
GTEX-117XS-3026-SM-5N9CA 66.4
GTEX-13FLW-1426-SM-5K7YE 66.3
GTEX-11GSO-2926-SM-5HL73 65.8
GTEX-144GL-3026-SM-5Q5CW 65.7
GTEX-13OVH-3026-SM-5MR4N 65.4
GTEX-11DXY-3226-SM-5GIDE 65.0
GTEX-111FC-3126-SM-5GZZ2 64.6
GTEX-YJ89-3026-SM-5IFJI 64.4
GTEX-12ZZY-3026-SM-5GCOU 63.8
GTEX-13NYS-3126-SM-5KLYV 62.9
GTEX-11NV4-2126-SM-5N9DS 62.4
GTEX-13JUV-2926-SM-5LZX7 61.1
GTEX-Y8DK-0826-SM-4TT3T 61.0
GTEX-1128S-2726-SM-5H12C 60.2
GTEX-145MG-3026-SM-5RQJA 59.6
GTEX-13X6J-3026-SM-5Q5CU 59.1
GTEX-13SLX-3126-SM-5S2Q5 58.9
GTEX-147GR-3026-SM-5S2ML 58.9
GTEX-QMR6-1426-SM-32PLA 58.8
GTEX-XOTO-3026-SM-4B65M 58.5
GTEX-1399T-3026-SM-5KLZC 58.3
GTEX-12ZZZ-3026-SM-5BC67 58.1
GTEX-1192X-3126-SM-5N9BY 57.5
GTEX-13PL6-3126-SM-5LUAR 57.3
GTEX-14A5I-2926-SM-5Q5CQ 57.2
GTEX-UTHO-3026-SM-3GAFB 57.0
GTEX-12WSH-3026-SM-5CVNI 56.4
GTEX-TSE9-3026-SM-3DB76 56.4
GTEX-ZVT3-3026-SM-5E43N 56.0
GTEX-145LS-3126-SM-5Q5BY 55.4
GTEX-OXRN-2426-SM-2I5EQ 55.1
GTEX-XLM4-3026-SM-4AT6L 55.1
GTEX-ZAJG-3126-SM-5HL9J 55.1
GTEX-13O3O-3126-SM-5KM3H 53.7
GTEX-13G51-3026-SM-5IJB8 53.3
GTEX-QDT8-2926-SM-32PKC 53.3
GTEX-NPJ8-1526-SM-2D7VU 52.9
GTEX-13OW8-2826-SM-5L3GC 51.8
GTEX-ZE7O-3126-SM-5HL5X 51.7
GTEX-RU72-3026-SM-5SI7Y 51.6
GTEX-13FHO-3026-SM-5J1O9 51.5
GTEX-QVUS-2826-SM-3GADB 50.6
GTEX-13X6K-2926-SM-5Q5D5 49.8
GTEX-13QIC-2926-SM-5J2NF 48.8
GTEX-11EMC-3226-SM-5EGKW 48.4
GTEX-131XW-3126-SM-5LZUC 48.4
GTEX-11GS4-3126-SM-5A5LH 47.6
GTEX-11EI6-3026-SM-5GZZO 47.5
GTEX-11OC5-0726-SM-5P9JK 47.5
GTEX-132Q8-3026-SM-5PNVG 47.4
GTEX-12WSD-3126-SM-5HL7P 47.2
GTEX-13OW7-3026-SM-5L3GY 46.2
GTEX-12ZZW-2926-SM-5LZUP 46.1
GTEX-11ONC-2926-SM-5P9JM 45.7
GTEX-11O72-2926-SM-5BC4V 45.4
GTEX-13S7M-3126-SM-5RQJQ 44.9
GTEX-N7MT-1126-SM-5SI7V 44.9
GTEX-13OVJ-2826-SM-5L3GW 43.9
GTEX-NPJ7-2726-SM-2I3FT 41.6
GTEX-1117F-3226-SM-5N9CT 40.6
GTEX-13JVG-3126-SM-5L3FH 40.5
GTEX-139T8-1026-SM-5J2MC 38.1
GTEX-13IVO-2926-SM-5L3CZ 38.0
GTEX-1445S-3026-SM-5O9BR 37.1
GTEX-11GSP-3226-SM-5986O 37.0
GTEX-11TTK-2926-SM-5PNYP 35.5
GTEX-13PVQ-3026-SM-5SI93 35.4
GTEX-ZZPT-3026-SM-5GZXH 35.0
GTEX-11WQK-3026-SM-5EQL6 34.5
GTEX-144FL-3026-SM-5O99C 32.2
GTEX-PWO3-0926-SM-2I5EY 30.3
GTEX-11OF3-2926-SM-5HL78 29.3
GTEX-12WSA-2926-SM-5EQ4D 28.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 62.9
Samples: 108

Max RPKM: 102.4
Min RPKM: 24
Std RPKM: 18.4
Median RPKM: 62.7
GTEX-WL46-0011-R10A-SM-3MJFQ 102.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 97.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 97.2
GTEX-12WSE-0011-R10b-SM-5P9JV 96.7
GTEX-T5JC-0011-R10A-SM-32PM2 96.1
GTEX-WZTO-0011-R10B-SM-4E3KB 92.4
GTEX-1313W-0011-R10b-SM-5DUXA 91.8
GTEX-WVLH-0011-R10A-SM-3MJFM 88.1
GTEX-12126-0011-R10b-SM-5BC6T 86.3
GTEX-12WSM-0011-R10a-SM-5DUWV 85.7
GTEX-T6MN-0011-R10A-SM-32QP7 85.4
GTEX-131XH-0011-R10a-SM-5EGLJ 84.6
GTEX-NL3H-0011-R10A-SM-2I3E9 84.6
GTEX-131YS-0011-R10b-SM-5EQ5N 84.5
GTEX-145MG-0011-R10a-SM-5PNWG 83.8
GTEX-13O3Q-0011-R10b-SM-5KM39 83.7
GTEX-YFC4-0011-R10a-SM-4SOK5 83.5
GTEX-X585-0011-R10A-SM-46MUY 83.2
GTEX-145MH-0011-R10b-SM-5PNUK 82.6
GTEX-13OW6-0011-R10a-SM-5L3HE 82.4
GTEX-12WSC-0011-R10a-SM-5GU57 81.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 80.9
GTEX-13X6J-0011-R10b-SM-5PNWA 79.7
GTEX-13JUV-0011-R10b-SM-5LZXR 79.5
GTEX-S7SE-0011-R10A-SM-2XCDF 79.3
GTEX-YJ89-0011-R10a-SM-4SOK9 78.9
GTEX-N7MS-0011-R10A-SM-2HMJK 77.8
GTEX-12WSF-0011-R10a-SM-5LZVH 76.8
GTEX-13FXS-0011-R10a-SM-5J2MA 76.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 76.3
GTEX-13NYB-0011-R10a-SM-5KM43 74.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 74.1
GTEX-Z93S-0011-R10a-SM-4RGNM 74.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 73.9
GTEX-13FLW-0011-R10b-SM-5LZZF 73.3
GTEX-WWYW-0011-R10A-SM-3NB35 73.2
GTEX-13OVL-0011-R10a-SM-5L3GS 73.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 73.1
GTEX-ZF28-0011-R10a-SM-4WWEH 72.8
GTEX-X4XX-0011-R10B-SM-46MWO 72.6
GTEX-147GR-0011-R10b-SM-5S2UM 70.1
GTEX-QDT8-0011-R10A-SM-32PKG 69.8
GTEX-13G51-0011-R10b-SM-5LZYF 69.6
GTEX-13S7M-0011-R10b-SM-5PNZB 69.4
GTEX-11WQC-0011-R10a-SM-57WCT 67.0
GTEX-13X6K-0011-R10a-SM-5P9JR 66.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 66.8
GTEX-13OW7-0011-R10a-SM-5L3H3 66.5
GTEX-13QIC-0011-R10a-SM-5O9C7 64.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 64.3
GTEX-14BIN-0011-R10a-SM-5S2UA 64.0
GTEX-11H98-0011-R10b-SM-5NQ98 63.9
GTEX-145LS-0011-R10a-SM-5PNUQ 63.2
GTEX-12WSH-0011-R10a-SM-5LZUS 63.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 62.3
GTEX-13FHO-0011-R10b-SM-5J2MM 61.7
GTEX-XLM4-0011-R10A-SM-4AT5P 61.4
GTEX-13SLX-0011-R10a-SM-5P9HV 61.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 60.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 59.6
GTEX-13X6I-0011-R10a-SM-5PNWI 59.5
GTEX-13CZV-0011-R10b-SM-5LZYD 58.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 57.3
GTEX-13NYS-0011-R10a-SM-5MR4S 57.1
GTEX-ZUA1-0011-R10a-SM-51MT6 57.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 56.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 56.6
GTEX-QMR6-0011-R10A-SM-32PKO 56.5
GTEX-13N1W-0011-R10b-SM-5MR4H 56.4
GTEX-14BIL-0011-R10a-SM-5SI75 56.3
GTEX-13OW8-0011-R10a-SM-5L3H6 56.2
GTEX-145LU-0011-R10a-SM-5PNWJ 55.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 55.6
GTEX-13QJC-0011-R10a-SM-5SI63 54.2
GTEX-147F4-0011-R10b-SM-5S2WC 54.2
GTEX-QVUS-0011-R10A-SM-3GIK3 54.2
GTEX-139TS-0011-R10a-SM-5K7TU 53.5
GTEX-ZVT3-0011-R10b-SM-57WB6 53.3
GTEX-N7MT-0011-R10A-SM-2I3E1 50.4
GTEX-ZXG5-0011-R10a-SM-57WDD 50.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 49.9
GTEX-13O3O-0011-R10a-SM-5LUA9 49.7
GTEX-OXRN-0011-R10A-SM-2I5GC 48.5
GTEX-NL4W-0011-R10A-SM-2I3DY 48.2
GTEX-TSE9-0011-R10A-SM-3DB7O 47.6
GTEX-11ZUS-0011-R10b-SM-5BC79 46.7
GTEX-P44H-0011-R10A-SM-2XCEK 46.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 45.6
GTEX-12WSD-0011-R10b-SM-5GU79 43.8
GTEX-13JVG-0011-R10b-SM-5KM2P 43.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 40.4
GTEX-1477Z-0011-R10b-SM-5S2RF 40.2
GTEX-XMD1-0011-R10A-SM-4AT4A 40.0
GTEX-13N2G-0011-R10a-SM-5MR34 39.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 38.8
GTEX-13NZA-0011-R10b-SM-5KM54 37.9
GTEX-13SLW-0011-R10a-SM-5S2UI 37.4
GTEX-1445S-0011-R10a-SM-5PNWB 35.5
GTEX-11WQK-0011-R10a-SM-5BC6R 34.4
GTEX-X261-0011-R10B-SM-4E3JT 33.7
GTEX-ZV68-0011-R10a-SM-51MT7 33.6
GTEX-RVPU-0011-R10A-SM-2XCAH 33.4
GTEX-X4EP-0011-R10B-SM-4QASJ 32.0
GTEX-14753-0011-R10b-SM-5S2WE 31.2
GTEX-OXRO-0011-R10A-SM-2I5EH 30.7
GTEX-12WSA-0011-R10b-SM-5P9ET 29.8
GTEX-13IVO-0011-R10a-SM-5LZY3 26.7
GTEX-131XW-0011-R10a-SM-5DUVA 24.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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