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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TYR
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Novocastra
 

Product name

HPA043241   HPA050889   NCL-L-TYROS  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Not known  

Other gene match

     

Released in version

16   16   1  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 
Immunocytochemistry


Validated
 

Validated
   
Immunohistochemistry

   

Validated
 
Western blot

Uncertain   Uncertain   Uncertain  
Protein array

Approved   Approved    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 

Formal validation: Independent

Validated

Antibody staining overlaps with antibody HPA050889.
 
Validated

Antibody staining overlaps with antibody HPA043241.
   
 

Standard validation

Supported   Supported    

     

Figure description

Immunofluorescent staining of human cell line SK-MEL-30 shows localization to vesicles.   Immunofluorescent staining of human cell line SK-MEL-30 shows localization to vesicles.    

Antibody dilution

1:49   1:192    

Literature conformity

The subcellular location is supported by literature.   The subcellular location is supported by literature.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 

Formal validation: Orthogonal

   
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 

   
 

 

 

Figure description

    Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.  
 

Formal validation: Orthogonal

   
Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
 

   
 

 

 

Figure description

    Distribution of protein expression (antibody staining) and RNA expression (TPM) across 36 tissues.  
 

Standard validation

    Supported  

     

Figure description

    Immunohistochemical staining of human skin shows strong cyoplasmic positivity in melanocytes.  

Expression

    RNA: detected in 1 tissues
Protein: detected in 2 cell types
 

Retrieval

    HIER pH9  

Antibody dilution

    1:100  

Literature conformity

    Consistent with extensive gene/protein characterization data.  

RNA consistency

    Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
  Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
  Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
 

     

Figure description

     

Target mass (kDa)

60.4   60.4   60.4  

Antibody dilution

1:250   1:960   1:500  

PROTEIN ARRAY

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000   1:7700    

ANTIGEN INFORMATION

 
 

Antibody HPA043241

 

Antibody HPA050889

 

Antibody CAB000079

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Not known  

Length (aa)

59   32    

Antigen sequence

APIGHNRESYMVPFIPLYRNGDFFISSKDLGYDYSYLQDSDPDSFQDYIK
SYLEQASRI
 
LLCRHKRKQLPEEKQPLLMEKEDYHSLYQSHL
   

Matching transcripts

TYR-001 - ENSP00000263321 [100%]
  TYR-001 - ENSP00000263321 [100%]
   

Other gene match

     
ANTIGEN VIEW
TYR-001
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.