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Gene name

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Chromosome

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In atlas

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Reliability

Reliability

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Validation

Method

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Method

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Searches

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Cell type

Expression

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Specificity

Cell line

Specificity

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Detectable

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Antibodies

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TYR
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

TYR

Gene description

Tyrosinase

Protein class

Disease related genes
Enzymes
FDA approved drug targets
Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (skin)
GTEx:Tissue enriched (skin)
FANTOM5:Tissue enriched (retina)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression in melanocytes.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
CAB000079
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Skin

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (skin)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (skin)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (retina)

GENE INFORMATION

Gene name

TYR (HGNC Symbol)

Synonyms

OCA1, OCA1A, OCAIA

Description

Tyrosinase (HGNC Symbol)

Entrez gene summary

The enzyme encoded by this gene catalyzes the first 2 steps, and at least 1 subsequent step, in the conversion of tyrosine to melanin. The enzyme has both tyrosine hydroxylase and dopa oxidase catalytic activities, and requires copper for function. Mutations in this gene result in oculocutaneous albinism, and nonpathologic polymorphisms result in skin pigmentation variation. The human genome contains a pseudogene similar to the 3' half of this gene. [provided by RefSeq, Oct 2008]

Chromosome

11

Cytoband

q14.3

Chromosome location (bp)

89177452 - 89295759

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000077498 (version 83.38)

Entrez gene

7299

UniProt

P14679 (UniProt - Evidence at protein level)

neXtProt

NX_P14679

Antibodypedia

TYR antibodies

PROTEIN BROWSER

TYR-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TYR-001
ENSP00000263321
ENST00000263321
P14679 [Direct mapping]
Tyrosinase
L8B082 [Target identity:100%; Query identity:100%]
Tyrosinase; Tyrosinase (Oculocutaneous albinism IA), isoform CRA_a
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Enzymes
   ENZYME proteins
   Oxidoreductases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
FDA approved drug targets
   Small molecule drugs
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004497 [monooxygenase activity]
GO:0004503 [monophenol monooxygenase activity]
GO:0005507 [copper ion binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005764 [lysosome]
GO:0005798 [Golgi-associated vesicle]
GO:0005829 [cytosol]
GO:0006583 [melanin biosynthetic process from tyrosine]
GO:0006726 [eye pigment biosynthetic process]
GO:0007601 [visual perception]
GO:0008152 [metabolic process]
GO:0008283 [cell proliferation]
GO:0009411 [response to UV]
GO:0016021 [integral component of membrane]
GO:0016491 [oxidoreductase activity]
GO:0033162 [melanosome membrane]
GO:0033280 [response to vitamin D]
GO:0034641 [cellular nitrogen compound metabolic process]
GO:0042438 [melanin biosynthetic process]
GO:0042470 [melanosome]
GO:0042803 [protein homodimerization activity]
GO:0043473 [pigmentation]
GO:0044281 [small molecule metabolic process]
GO:0046982 [protein heterodimerization activity]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048538 [thymus development]
GO:0051591 [response to cAMP]
GO:0055114 [oxidation-reduction process]
Show all
529 aa
60.4 kDa
Yes 1

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