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CDH17
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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:300.5TPM
GTEx:96.5RPKM
FANTOM5:984.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA023614

 

Antibody HPA023616

 

Antibody HPA026556

 

Antibody CAB025143

 

Glandular cells

Medium   High   High   High  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

300.5

overview Male, age 65
Sample 1
TPM: 351.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 334.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 220.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 294.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

96.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 96.5
Samples: 88

Max RPKM: 235.6
Min RPKM: 0.3
Std RPKM: 64.8
Median RPKM: 92.6
GTEX-ZPCL-1726-SM-57WEO 235.6
GTEX-14DAR-1426-SM-5RQIR 230.0
GTEX-111YS-1426-SM-5GID8 227.9
GTEX-13D11-0726-SM-5LZZB 205.1
GTEX-1122O-1326-SM-5H11F 200.7
GTEX-YEC4-1726-SM-4W21E 197.9
GTEX-ZTSS-0926-SM-59865 195.5
GTEX-145LT-1026-SM-5LU9O 191.1
GTEX-ZTX8-0526-SM-59HLD 188.0
GTEX-13PL7-2626-SM-5IFH4 185.3
GTEX-131XF-1326-SM-5GCMQ 183.9
GTEX-ZLV1-1126-SM-4WWBW 181.3
GTEX-XUZC-1426-SM-4BRV3 181.1
GTEX-YB5E-1526-SM-5IFIE 170.5
GTEX-11EQ9-1326-SM-5985X 169.9
GTEX-ZXES-1526-SM-5NQ95 168.8
GTEX-11DXX-1626-SM-5H11H 166.5
GTEX-ZZ64-0526-SM-5GZXM 161.2
GTEX-YF7O-1826-SM-5IFIU 160.3
GTEX-Y9LG-1626-SM-5IFHM 156.3
GTEX-ZVZP-1826-SM-5GZXB 155.1
GTEX-11I78-1126-SM-5A5K5 154.6
GTEX-X5EB-1626-SM-4E3IV 152.5
GTEX-133LE-1426-SM-5IFH1 140.7
GTEX-1399S-2026-SM-5KM4B 136.8
GTEX-13113-1226-SM-5EGHT 135.8
GTEX-11DXZ-1326-SM-5H11X 135.2
GTEX-11P7K-1626-SM-5GU63 134.9
GTEX-139YR-2226-SM-5IFFW 132.4
GTEX-XBED-1426-SM-4AT4G 131.7
GTEX-ZYWO-1526-SM-5SIAL 131.6
GTEX-13FTW-2026-SM-5IJE2 129.4
GTEX-ZYFG-2026-SM-5E43Y 127.5
GTEX-14E6E-1626-SM-5RQI7 111.7
GTEX-1399R-2026-SM-5K7WN 107.1
GTEX-WQUQ-2426-SM-4MVNW 103.4
GTEX-ZTPG-2626-SM-57WFX 103.4
GTEX-XXEK-1026-SM-4BRUW 101.7
GTEX-ZA64-1226-SM-5HL7B 99.9
GTEX-139T6-1026-SM-5IJGC 98.6
GTEX-XGQ4-1326-SM-4GIDU 97.6
GTEX-ZEX8-1826-SM-57WBH 96.6
GTEX-ZLFU-1526-SM-4WWBT 95.0
GTEX-VJYA-0926-SM-4KL1N 93.4
GTEX-11P82-0826-SM-5P9GU 91.7
GTEX-13O61-1326-SM-5KM31 89.7
GTEX-Y114-1426-SM-4TT6W 84.1
GTEX-12BJ1-1926-SM-5HL9Z 78.9
GTEX-ZVP2-1726-SM-5GU5P 78.3
GTEX-ZVT2-2126-SM-5NQ93 77.6
GTEX-WFJO-0926-SM-4LVM2 77.3
GTEX-13CF3-1226-SM-5LZXN 77.2
GTEX-13RTK-0826-SM-5Q5C6 73.7
GTEX-WFG7-1726-SM-4LVME 69.9
GTEX-ZPIC-2326-SM-57WDW 67.6
GTEX-11NSD-1726-SM-5N9C3 66.2
GTEX-XAJ8-0526-SM-47JYK 63.3
GTEX-11XUK-1426-SM-5EQMG 63.3
GTEX-WH7G-1626-SM-4LVMY 59.1
GTEX-1399U-2126-SM-5IFEZ 57.1
GTEX-13FH7-1226-SM-5IJFK 56.8
GTEX-13O21-1026-SM-5IJDU 52.8
GTEX-WFG8-1626-SM-4LVMB 51.0
GTEX-Y3IK-1726-SM-4YCCR 48.0
GTEX-Z9EW-0926-SM-5CVMM 47.1
GTEX-ZP4G-1626-SM-57WGD 43.5
GTEX-11VI4-1626-SM-5EQKO 39.8
GTEX-131XG-1726-SM-5LZUR 39.0
GTEX-Y5LM-1626-SM-4VDTB 38.6
GTEX-WRHK-1026-SM-4MVOD 36.6
GTEX-12WSK-1526-SM-5CVNO 28.8
GTEX-X15G-1426-SM-4PQZK 26.0
GTEX-ZQG8-2526-SM-57WEQ 24.8
GTEX-145ME-0926-SM-5O9AR 24.5
GTEX-13QBU-1926-SM-5IJEW 21.8
GTEX-13OVI-1926-SM-5IJCG 18.3
GTEX-VUSG-1726-SM-4KKZL 16.0
GTEX-111CU-1326-SM-5NQ8L 9.6
GTEX-ZQUD-0926-SM-57WE3 9.4
GTEX-ZF2S-1726-SM-57WFT 7.2
GTEX-148VJ-2226-SM-5NQ9M 6.6
GTEX-117YX-0326-SM-5GICL 2.7
GTEX-WEY5-1526-SM-4LMJF 2.6
GTEX-13111-1426-SM-5DUW3 2.3
GTEX-ZC5H-2326-SM-4WAYT 1.9
GTEX-XMK1-1826-SM-4B66F 1.3
GTEX-UPK5-2026-SM-4JBIM 0.9
GTEX-1192X-2526-SM-59868 0.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

984.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 984.4
FF:10024-101D6 15,40,85 years, mixed 984.4

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The Human Protein Atlas project is funded
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