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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:113.6TPM
GTEx:33.6RPKM
FANTOM5:115.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA024190

  

Antibody HPA024637

  

Antibody HPA046329

  

Antibody CAB004666

  

Adipocytes

 Not detected   Not detected   Not detected   Not detected  

Chondrocytes

 Medium   Medium   Not detected  

Fibroblasts

 Not detected   Medium   Not detected   Not detected  

Peripheral nerve

 Not detected   Low   Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA024190

  

Antibody HPA024637

  

Antibody HPA046329

  

Antibody CAB004666

  

Adipocytes

 Not detected   Not detected   Not detected   Medium  

Chondrocytes

 Medium   Medium  

Fibroblasts

 Not detected   Low   Not detected   Not detected  

Peripheral nerve

 Not detected   Low   Not detected   Not detected  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

113.6
N/A Female, age 80
Sample 1
TPM: 109.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 170.1
N/A Female, age 57
Sample 3
TPM: 146.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 59.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 82.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

33.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 33.3
Samples: 350

Max RPKM: 233.8
Min RPKM: 8.3
Std RPKM: 21.2
Median RPKM: 27.7
GTEX-YB5E-2126-SM-5IFI7 233.8
GTEX-PWCY-1926-SM-3NB25 114.0
GTEX-11P82-1726-SM-5Q5AT 98.5
GTEX-ZQG8-1526-SM-5HL65 94.1
GTEX-13QBU-2526-SM-5LU4X 91.2
GTEX-R55G-2426-SM-2TC5I 89.2
GTEX-145ME-1926-SM-5SI9S 83.4
GTEX-ZXES-2026-SM-5NQ6R 81.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 34.0
Samples: 227

Max RPKM: 130.3
Min RPKM: 5.1
Std RPKM: 21.5
Median RPKM: 28.6
GTEX-1122O-0926-SM-5N9C9 130.3
GTEX-Y5LM-0826-SM-4VDSW 116.7
GTEX-ZZ64-0626-SM-5GZWR 98.8
GTEX-ZF2S-1526-SM-5S2OO 98.2
GTEX-11EQ9-1126-SM-5987I 96.4
GTEX-1399S-1426-SM-5PNYQ 95.4
GTEX-12WSL-1126-SM-5CVNK 91.9
GTEX-1339X-0726-SM-5L3FF 88.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

115.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 115.4
FF:10010-101C1 65,65,76 years, mixed 115.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.