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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:38.8TPM
GTEx:30.5RPKM
FANTOM5:49.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA024190

 

Antibody HPA024637

 

Antibody HPA046329

 

Antibody CAB004666

 

Adipocytes

Not detected   Not detected   Not detected   Not detected  

Glandular cells

Not detected   Medium   Low   Low  

Myoepithelial cells

Medium   Medium   Medium   Not detected  
       
       
       

BREAST - HPA RNA-seq

Average TPM

38.8

overview Female, age 52
Sample 1
TPM: 32.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 36.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 29.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 57.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

30.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 30.5
Samples: 214

Max RPKM: 128.9
Min RPKM: 6.7
Std RPKM: 23.3
Median RPKM: 21.2
GTEX-YB5E-1726-SM-5IFJ3 128.9
GTEX-ZLFU-2126-SM-4WWEV 127.8
GTEX-ZZ64-1226-SM-5E43R 113.0
GTEX-11P82-1326-SM-5HL62 107.8
GTEX-11ZTT-2326-SM-5EQLG 105.2
GTEX-13CF3-2126-SM-5IFJP 98.1
GTEX-ZAB4-2526-SM-5HL8M 87.7
GTEX-ZT9W-2026-SM-51MRA 87.0
GTEX-145ME-1526-SM-5Q5F2 86.1
GTEX-ZQG8-0726-SM-5P9H9 83.6
GTEX-XGQ4-0926-SM-4AT4U 83.5
GTEX-YB5K-1626-SM-5IFIN 79.9
GTEX-Y9LG-1426-SM-5IFJZ 77.5
GTEX-XMK1-1126-SM-4IHJ8 73.6
GTEX-139T6-1626-SM-5PNYZ 72.8
GTEX-PSDG-1626-SM-48TCQ 70.0
GTEX-YEC3-1026-SM-5IFI5 66.4
GTEX-WY7C-2726-SM-3NB3P 65.2
GTEX-117YX-1426-SM-5H12H 64.8
GTEX-ZQUD-1926-SM-51MSA 64.6
GTEX-UTHO-1026-SM-3GAF7 62.4
GTEX-S4Q7-1126-SM-4AD6R 60.3
GTEX-Y8E4-1626-SM-5S2MW 59.4
GTEX-144GM-0926-SM-5O994 59.2
GTEX-Y5V6-2126-SM-4WWFX 58.9
GTEX-REY6-2426-SM-48FF5 57.5
GTEX-11TUW-1826-SM-5BC5D 57.3
GTEX-13FTW-1426-SM-5LZWZ 57.3
GTEX-U8XE-0826-SM-4E3J1 54.5
GTEX-11DXZ-1926-SM-5GZZL 54.4
GTEX-14E6E-1326-SM-5S2NR 54.4
GTEX-11EQ9-1826-SM-5Q5AJ 53.4
GTEX-ZPIC-1126-SM-5BC7F 53.4
GTEX-11I78-2226-SM-5PNYA 52.8
GTEX-13FTX-1126-SM-5N9EN 52.6
GTEX-Y114-2026-SM-4TT7L 52.1
GTEX-ZDYS-1126-SM-5K7UB 51.5
GTEX-QMRM-1626-SM-4R1KV 51.4
GTEX-1211K-1926-SM-5EQLB 50.0
GTEX-13O61-1826-SM-5KM4I 49.8
GTEX-1399U-1826-SM-5PNZ1 48.2
GTEX-12KS4-0126-SM-5Q5A5 48.0
GTEX-ZA64-1526-SM-5CVMD 47.6
GTEX-SE5C-2126-SM-4BRUJ 46.7
GTEX-TKQ1-0226-SM-33HB5 46.7
GTEX-T6MO-0326-SM-32QOK 45.6
GTEX-R55D-0826-SM-48FEA 44.9
GTEX-XQ3S-1326-SM-4BOPQ 44.6
GTEX-YFCO-1826-SM-4W1YH 44.6
GTEX-RUSQ-2026-SM-4GIAK 43.8
GTEX-ZYWO-2326-SM-5GZY4 42.5
GTEX-ZV6S-1826-SM-5NQ8D 42.1
GTEX-R53T-1526-SM-48FEK 41.2
GTEX-ZYT6-0126-SM-5E45J 40.0
GTEX-12BJ1-1826-SM-5HL9N 39.8
GTEX-132AR-0826-SM-5EGK6 36.9
GTEX-11ZUS-0826-SM-5FQUY 36.5
GTEX-WFON-1826-SM-3GILG 36.2
GTEX-S4UY-0726-SM-4AD6X 36.0
GTEX-13FHO-0826-SM-5L3E8 35.5
GTEX-133LE-1726-SM-5K7VQ 35.0
GTEX-XV7Q-2326-SM-4BRVZ 34.8
GTEX-11NSD-0926-SM-5N9DR 33.9
GTEX-X4XY-0926-SM-4E3JD 33.8
GTEX-ZDXO-0126-SM-5S2ND 33.3
GTEX-11ONC-2126-SM-5HL6E 32.0
GTEX-XUZC-1626-SM-4BRVP 32.0
GTEX-ZDTT-2126-SM-5S2OJ 31.5
GTEX-11TT1-2126-SM-5GU5Y 31.1
GTEX-13N1W-0626-SM-5MR4U 30.6
GTEX-13S86-1226-SM-5S2OA 30.2
GTEX-13PVQ-1026-SM-5KM3M 29.9
GTEX-145MO-0826-SM-5NQBL 29.8
GTEX-13W3W-1226-SM-5LU4H 29.5
GTEX-XQ8I-2426-SM-4WAXY 29.3
GTEX-XYKS-1326-SM-4BRUN 29.1
GTEX-12WSN-1326-SM-5GCNT 28.6
GTEX-T5JW-2026-SM-4DM63 28.4
GTEX-11LCK-2426-SM-5HL5F 27.7
GTEX-132NY-0826-SM-5K7Y7 27.6
GTEX-144GL-2026-SM-5LU3O 27.5
GTEX-U412-1826-SM-4DXTJ 27.2
GTEX-ZYFC-0826-SM-5E44K 27.1
GTEX-TKQ2-1826-SM-33HB2 26.6
GTEX-YJ8O-2226-SM-5IFHW 26.5
GTEX-1122O-1226-SM-5H113 26.3
GTEX-S32W-2026-SM-4AD6E 26.1
GTEX-12WSM-1726-SM-5BC6J 25.9
GTEX-Y5V5-2126-SM-4WWFO 25.4
GTEX-14AS3-1626-SM-5S2OY 25.3
GTEX-145MN-1926-SM-5SIAI 25.2
GTEX-XUW1-2326-SM-4BOO5 25.1
GTEX-ZLV1-1426-SM-4WWES 25.1
GTEX-S33H-0326-SM-4AD6N 25.0
GTEX-ZVT4-1026-SM-57WC4 25.0
GTEX-11P81-1926-SM-5BC53 24.9
GTEX-Y8LW-1626-SM-5IFHX 24.9
GTEX-1117F-2826-SM-5GZXL 24.7
GTEX-11DZ1-0326-SM-5N9BN 23.1
GTEX-WXYG-2226-SM-4E3IM 22.9
GTEX-13D11-1026-SM-5IJFB 22.7
GTEX-ZY6K-1626-SM-5GZWV 21.9
GTEX-1313W-0826-SM-5EQ4T 21.8
GTEX-QEL4-2126-SM-447AE 21.8
GTEX-13113-1726-SM-5GCOO 21.7
GTEX-139TU-0626-SM-5KM3X 21.4
GTEX-SIU7-1626-SM-4BRUK 21.4
GTEX-13O3Q-2226-SM-5KM4O 21.1
GTEX-ZUA1-1526-SM-59HLS 21.1
GTEX-146FH-0826-SM-5SI8T 20.9
GTEX-TMMY-0726-SM-33HBE 20.7
GTEX-WI4N-1426-SM-3LK7H 20.6
GTEX-11O72-2126-SM-5N9FO 20.5
GTEX-Y3IK-2326-SM-4WWDT 19.9
GTEX-ZV7C-1826-SM-5NQ83 19.6
GTEX-Y5LM-1726-SM-4VDSX 19.3
GTEX-UJHI-1426-SM-3DB9C 19.2
GTEX-WRHU-0326-SM-3MJFY 19.1
GTEX-ZYW4-0826-SM-5GIDG 19.1
GTEX-ZVZQ-0826-SM-51MRF 18.6
GTEX-117XS-1926-SM-5GICO 18.4
GTEX-11NV4-2026-SM-5N9DG 18.4
GTEX-11OF3-1926-SM-59889 18.3
GTEX-U3ZN-1926-SM-4DXSG 18.3
GTEX-1269C-2426-SM-5FQSN 18.0
GTEX-ZXES-0826-SM-5E43C 17.8
GTEX-13PL6-2926-SM-5L3I2 17.7
GTEX-X4EP-2926-SM-3P5YQ 17.7
GTEX-ZVT2-1826-SM-5NQ8W 17.5
GTEX-13N11-1726-SM-5J1OJ 17.3
GTEX-ZVTK-0326-SM-51MRR 17.3
GTEX-XOT4-0726-SM-4GIAW 17.2
GTEX-14ABY-2126-SM-5QGQZ 17.1
GTEX-ZC5H-2626-SM-5J2MG 17.0
GTEX-XUJ4-1926-SM-4BOOV 16.9
GTEX-ZTTD-1026-SM-51MRD 16.8
GTEX-X261-0626-SM-3NMD9 16.7
GTEX-1192X-2326-SM-5987X 16.6
GTEX-11WQK-2426-SM-5GU5C 16.6
GTEX-13NZ8-0126-SM-5IJCT 16.5
GTEX-13QIC-2326-SM-5LU5N 16.5
GTEX-Y3I4-1526-SM-4TT7K 16.5
GTEX-ZZPU-0626-SM-5E43T 16.5
GTEX-13O3O-0826-SM-5K7WE 16.3
GTEX-11DXY-2326-SM-5GICW 16.2
GTEX-TML8-1226-SM-32QON 16.1
GTEX-VJWN-0726-SM-3GIJ8 16.1
GTEX-YFC4-1426-SM-5IFJG 16.1
GTEX-R3RS-0626-SM-48FE1 15.9
GTEX-13NZ9-1026-SM-5MR5K 15.7
GTEX-X15G-1626-SM-3NMB3 15.7
GTEX-12WSK-2226-SM-5GCO5 15.6
GTEX-ZAJG-0626-SM-5HL8X 15.6
GTEX-WYBS-0926-SM-3NM94 15.5
GTEX-RWS6-1926-SM-47JXY 15.4
GTEX-131YS-0626-SM-5EGKL 15.3
GTEX-ZVE2-1226-SM-5NQ8R 15.2
GTEX-147F4-2826-SM-5NQBN 15.1
GTEX-XBED-1626-SM-47JYN 15.1
GTEX-11GSO-1926-SM-5A5K3 15.0
GTEX-S341-1526-SM-4AD6K 14.8
GTEX-QVJO-1826-SM-447C9 14.7
GTEX-S7SE-0826-SM-4AT4D 14.5
GTEX-ZF3C-2326-SM-5S2MZ 14.3
GTEX-13O3P-0826-SM-5L3DH 14.2
GTEX-13OW8-0226-SM-5K7UP 14.1
GTEX-VUSG-2226-SM-4KKZO 14.0
GTEX-12ZZX-1126-SM-5EGKB 13.9
GTEX-ZF2S-2026-SM-5E461 13.9
GTEX-11EMC-2026-SM-5A5JV 13.8
GTEX-13CF2-2026-SM-5K7VI 13.8
GTEX-145LT-0726-SM-5S2VM 13.8
GTEX-WYVS-1726-SM-3NMAY 13.7
GTEX-11EM3-1326-SM-5N9C6 13.4
GTEX-ZU9S-1926-SM-5NQBP 13.4
GTEX-11WQC-1726-SM-5GU4W 13.2
GTEX-Q2AG-0326-SM-48U1O 13.0
GTEX-ZF29-1926-SM-5S2P1 13.0
GTEX-T2IS-1526-SM-32QPR 12.8
GTEX-11PRG-0826-SM-5EQ6A 12.7
GTEX-S4P3-1326-SM-4AD6V 12.7
GTEX-W5X1-2326-SM-3GIL6 12.7
GTEX-139T8-0826-SM-5L3DE 12.3
GTEX-11DXW-0626-SM-5N9ER 12.1
GTEX-12WSB-0626-SM-59HJO 12.1
GTEX-XMD2-0926-SM-4WWEF 12.1
GTEX-UPK5-2326-SM-3P5Z8 12.0
GTEX-131XW-0726-SM-5EGK3 11.6
GTEX-U3ZH-1426-SM-4DXSR 11.6
GTEX-11EI6-0626-SM-5985T 11.5
GTEX-13W46-0826-SM-5LU3H 11.5
GTEX-RU72-0626-SM-46MUI 11.5
GTEX-13FTY-2226-SM-5J1ND 11.4
GTEX-QDT8-0626-SM-48TYW 11.4
GTEX-T5JC-2126-SM-32PMO 11.4
GTEX-1314G-1226-SM-5BC6D 11.1
GTEX-ZWKS-2826-SM-5NQ74 11.1
GTEX-ZTX8-1226-SM-4YCE9 10.9
GTEX-132Q8-1426-SM-5EGK7 10.8
GTEX-13OW5-2226-SM-5L3HC 10.8
GTEX-T6MN-0726-SM-32PML 10.7
GTEX-11GS4-2126-SM-5A5KR 10.2
GTEX-14753-2426-SM-5LU8U 10.2
GTEX-Y111-2026-SM-4SOJA 10.1
GTEX-WOFL-0826-SM-3MJG1 10.0
GTEX-ZEX8-2226-SM-57WC6 10.0
GTEX-T2YK-2226-SM-32QPT 9.9
GTEX-11P7K-0726-SM-5EGKX 9.7
GTEX-QEG5-0726-SM-4R1JQ 9.2
GTEX-111YS-1926-SM-5GICC 8.8
GTEX-13NZB-2126-SM-5MR4Y 8.6
GTEX-XMD1-0826-SM-4AT52 8.1
GTEX-R55F-1726-SM-2TF4R 7.0
GTEX-WYJK-1326-SM-3NB2T 6.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

49.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 49.8
FF:10080-102A8 77 years, female 49.8

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