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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:37.5TPM
GTEx:15.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA024190

 

Antibody HPA024637

 

Antibody HPA046329

 

Antibody CAB004666

 

Endothelial cells

Low   Low   Low   Not detected  

Glial cells

Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Not detected   Low  

Neuropil

Low   Low   Not detected   Not detected  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

37.5

N/A Male, age 5
Sample 1
TPM: 48.7
overview Female, age 40
Sample 2
TPM: 31.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 32.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

15.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 16.2
Samples: 114

Max RPKM: 25.4
Min RPKM: 6.3
Std RPKM: 3.6
Median RPKM: 15.9
GTEX-11GSP-3226-SM-5986O 25.4
GTEX-ZE7O-3126-SM-5HL5X 24.8
GTEX-13OW7-3026-SM-5L3GY 22.5
GTEX-12WSD-3126-SM-5HL7P 22.4
GTEX-11OC5-0726-SM-5P9JK 22.3
GTEX-131XW-3126-SM-5LZUC 22.3
GTEX-13OVJ-2826-SM-5L3GW 22.0
GTEX-144FL-3026-SM-5O99C 22.0
GTEX-11TTK-2926-SM-5PNYP 21.7
GTEX-13JVG-3126-SM-5L3FH 21.7
GTEX-139T8-1026-SM-5J2MC 21.6
GTEX-12ZZW-2926-SM-5LZUP 21.4
GTEX-1445S-3026-SM-5O9BR 21.3
GTEX-PWO3-0926-SM-2I5EY 21.3
GTEX-11EMC-3226-SM-5EGKW 20.6
GTEX-11GSO-2926-SM-5HL73 20.5
GTEX-RU72-3026-SM-5SI7Y 20.3
GTEX-1192X-3126-SM-5N9BY 19.9
GTEX-11EI6-3026-SM-5GZZO 19.8
GTEX-144GL-3026-SM-5Q5CW 19.8
GTEX-145MG-3026-SM-5RQJA 19.7
GTEX-11WQK-3026-SM-5EQL6 19.3
GTEX-13OW6-3026-SM-5J2MI 19.2
GTEX-13X6K-2926-SM-5Q5D5 19.2
GTEX-145MF-2726-SM-5O995 19.2
GTEX-13JUV-2926-SM-5LZX7 18.8
GTEX-OXRN-2426-SM-2I5EQ 18.8
GTEX-QVJO-1426-SM-2S1QY 18.7
GTEX-ZVT3-3026-SM-5E43N 18.6
GTEX-11DXW-1126-SM-5H12Q 18.5
GTEX-13S7M-3126-SM-5RQJQ 18.4
GTEX-X4XX-3026-SM-3NMB2 18.4
GTEX-X585-3026-SM-46MWF 18.4
GTEX-14A5I-2926-SM-5Q5CQ 18.3
GTEX-11NUK-2926-SM-5A5MD 18.2
GTEX-12WSA-2926-SM-5EQ4D 18.1
GTEX-14ASI-3026-SM-5S2PN 18.1
GTEX-1128S-2726-SM-5H12C 17.8
GTEX-14BMV-3026-SM-5S2PQ 17.7
GTEX-QVUS-2826-SM-3GADB 17.6
GTEX-13NYS-3126-SM-5KLYV 17.5
GTEX-13OW8-2826-SM-5L3GC 17.4
GTEX-R55F-1326-SM-5S2V4 17.4
GTEX-13FXS-3126-SM-5J2NN 17.3
GTEX-132Q8-3026-SM-5PNVG 17.2
GTEX-1399T-3026-SM-5KLZC 17.2
GTEX-XLM4-3026-SM-4AT6L 17.1
GTEX-11PRG-2926-SM-5987A 17.0
GTEX-13X6J-3026-SM-5Q5CU 16.9
GTEX-WWYW-3126-SM-3NB39 16.9
GTEX-12ZZZ-3026-SM-5BC67 16.8
GTEX-QDT8-2926-SM-32PKC 16.6
GTEX-YJ89-3026-SM-5IFJI 16.4
GTEX-Q2AG-2926-SM-2HMJ3 16.3
GTEX-13QIC-2926-SM-5J2NF 16.2
GTEX-11ONC-2926-SM-5P9JM 15.9
GTEX-12ZZX-2926-SM-5GCOQ 15.9
GTEX-13IVO-2926-SM-5L3CZ 15.8
GTEX-13O3O-3126-SM-5KM3H 15.8
GTEX-NPJ7-2726-SM-2I3FT 15.8
GTEX-ZAK1-3026-SM-5S2MJ 15.7
GTEX-13NYB-3026-SM-5IJD7 15.4
GTEX-ZZPT-3026-SM-5GZXH 15.4
GTEX-13FHO-3026-SM-5J1O9 15.3
GTEX-13NYC-2826-SM-5K7WR 15.3
GTEX-13PVQ-3026-SM-5SI93 15.2
GTEX-1117F-3226-SM-5N9CT 15.0
GTEX-11DXY-3226-SM-5GIDE 15.0
GTEX-13O3Q-2926-SM-5KM45 15.0
GTEX-13OVH-3026-SM-5MR4N 15.0
GTEX-QMR6-1426-SM-32PLA 15.0
GTEX-YFC4-3126-SM-5PNV6 15.0
GTEX-131YS-3126-SM-5KLYT 14.8
GTEX-WZTO-2926-SM-3NM9I 14.8
GTEX-ZYFD-3026-SM-5E44C 14.7
GTEX-11GS4-3126-SM-5A5LH 14.6
GTEX-Y111-2726-SM-4TT3N 14.5
GTEX-145LS-3126-SM-5Q5BY 14.4
GTEX-111FC-3126-SM-5GZZ2 14.3
GTEX-ZUA1-3026-SM-59HJC 14.3
GTEX-T5JC-2426-SM-3NMDB 14.2
GTEX-TSE9-3026-SM-3DB76 14.2
GTEX-12126-1026-SM-5P9JJ 14.1
GTEX-12ZZY-3026-SM-5GCOU 13.8
GTEX-Y8DK-0826-SM-4TT3T 13.8
GTEX-12WSC-3026-SM-5GCNF 13.7
GTEX-13FHP-3026-SM-5IJBS 13.7
GTEX-11NV4-2126-SM-5N9DS 13.6
GTEX-XOTO-3026-SM-4B65M 13.6
GTEX-WHSE-3026-SM-3P5ZH 13.3
GTEX-WVLH-3026-SM-3MJG9 13.3
GTEX-145MH-3026-SM-5Q5DZ 13.1
GTEX-T6MN-2626-SM-32PMQ 13.0
GTEX-13PL6-3126-SM-5LUAR 12.9
GTEX-13SLX-3126-SM-5S2Q5 12.7
GTEX-147GR-3026-SM-5S2ML 12.7
GTEX-NPJ8-1526-SM-2D7VU 12.7
GTEX-RNOR-2326-SM-2TF4I 12.7
GTEX-13FLW-1426-SM-5K7YE 12.6
GTEX-11O72-2926-SM-5BC4V 12.5
GTEX-T2IS-3026-SM-32QPM 12.3
GTEX-13VXU-2926-SM-5LU5C 12.1
GTEX-UTHO-3026-SM-3GAFB 12.0
GTEX-12WSH-3026-SM-5CVNI 11.5
GTEX-13G51-3026-SM-5IJB8 11.4
GTEX-1313W-3126-SM-5LZUI 11.3
GTEX-117XS-3026-SM-5N9CA 10.6
GTEX-11ZUS-2926-SM-5FQSL 10.3
GTEX-PVOW-2526-SM-2XCF7 10.3
GTEX-Z93S-2926-SM-57WB9 10.3
GTEX-WL46-2926-SM-3LK82 10.2
GTEX-N7MT-1126-SM-5SI7V 9.1
GTEX-11OF3-2926-SM-5HL78 7.7
GTEX-ZAJG-3126-SM-5HL9J 6.3
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 15.1
Samples: 108

Max RPKM: 29.3
Min RPKM: 8.4
Std RPKM: 3.9
Median RPKM: 14.6
GTEX-1445S-0011-R10a-SM-5PNWB 29.3
GTEX-12WSD-0011-R10b-SM-5GU79 28.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 26.3
GTEX-13JUV-0011-R10b-SM-5LZXR 25.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 23.6
GTEX-13SLW-0011-R10a-SM-5S2UI 22.0
GTEX-14753-0011-R10b-SM-5S2WE 21.1
GTEX-1477Z-0011-R10b-SM-5S2RF 20.9
GTEX-131XW-0011-R10a-SM-5DUVA 20.1
GTEX-11WQK-0011-R10a-SM-5BC6R 20.0
GTEX-13OW8-0011-R10a-SM-5L3H6 19.9
GTEX-11WQC-0011-R10a-SM-57WCT 19.6
GTEX-ZV68-0011-R10a-SM-51MT7 19.6
GTEX-12WSA-0011-R10b-SM-5P9ET 19.5
GTEX-147F4-0011-R10b-SM-5S2WC 18.8
GTEX-NL4W-0011-R10A-SM-2I3DY 18.8
GTEX-13FXS-0011-R10a-SM-5J2MA 18.6
GTEX-13QJC-0011-R10a-SM-5SI63 18.4
GTEX-QVUS-0011-R10A-SM-3GIK3 18.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 18.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 18.1
GTEX-TSE9-0011-R10A-SM-3DB7O 17.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 17.7
GTEX-11H98-0011-R10b-SM-5NQ98 17.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 17.6
GTEX-13OW6-0011-R10a-SM-5L3HE 17.6
GTEX-145LU-0011-R10a-SM-5PNWJ 17.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 17.6
GTEX-145MG-0011-R10a-SM-5PNWG 17.3
GTEX-XLM4-0011-R10A-SM-4AT5P 17.1
GTEX-139TS-0011-R10a-SM-5K7TU 17.0
GTEX-13NYS-0011-R10a-SM-5MR4S 17.0
GTEX-13JVG-0011-R10b-SM-5KM2P 16.6
GTEX-RVPU-0011-R10A-SM-2XCAH 16.3
GTEX-13N2G-0011-R10a-SM-5MR34 16.2
GTEX-12126-0011-R10b-SM-5BC6T 16.1
GTEX-14BIL-0011-R10a-SM-5SI75 15.9
GTEX-QMR6-0011-R10A-SM-32PKO 15.9
GTEX-13X6I-0011-R10a-SM-5PNWI 15.8
GTEX-P44H-0011-R10A-SM-2XCEK 15.8
GTEX-X4EP-0011-R10B-SM-4QASJ 15.7
GTEX-13OVL-0011-R10a-SM-5L3GS 15.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 15.3
GTEX-13X6K-0011-R10a-SM-5P9JR 15.3
GTEX-ZUA1-0011-R10a-SM-51MT6 15.3
GTEX-12WSM-0011-R10a-SM-5DUWV 15.2
GTEX-T5JC-0011-R10A-SM-32PM2 15.0
GTEX-YJ89-0011-R10a-SM-4SOK9 15.0
GTEX-X4XX-0011-R10B-SM-46MWO 14.9
GTEX-13O3O-0011-R10a-SM-5LUA9 14.8
GTEX-13FHO-0011-R10b-SM-5J2MM 14.7
GTEX-OXRN-0011-R10A-SM-2I5GC 14.7
GTEX-WWYW-0011-R10A-SM-3NB35 14.7
GTEX-X585-0011-R10A-SM-46MUY 14.7
GTEX-131XH-0011-R10a-SM-5EGLJ 14.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 14.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 14.4
GTEX-147GR-0011-R10b-SM-5S2UM 14.1
GTEX-QDT8-0011-R10A-SM-32PKG 14.1
GTEX-ZVT3-0011-R10b-SM-57WB6 14.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 14.1
GTEX-13NYB-0011-R10a-SM-5KM43 14.0
GTEX-X261-0011-R10B-SM-4E3JT 14.0
GTEX-13S7M-0011-R10b-SM-5PNZB 13.9
GTEX-OXRO-0011-R10A-SM-2I5EH 13.7
GTEX-12WSF-0011-R10a-SM-5LZVH 13.6
GTEX-ZF28-0011-R10a-SM-4WWEH 13.6
GTEX-S7SE-0011-R10A-SM-2XCDF 13.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 13.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 13.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 13.3
GTEX-13CZV-0011-R10b-SM-5LZYD 13.2
GTEX-NPJ8-0011-R10A-SM-2YUMO 13.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 12.9
GTEX-13OW7-0011-R10a-SM-5L3H3 12.8
GTEX-ZXG5-0011-R10a-SM-57WDD 12.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 12.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 12.5
GTEX-XMD1-0011-R10A-SM-4AT4A 12.5
GTEX-N7MS-0011-R10A-SM-2HMJK 12.4
GTEX-T6MN-0011-R10A-SM-32QP7 12.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 12.4
GTEX-13O3Q-0011-R10b-SM-5KM39 12.3
GTEX-12WSC-0011-R10a-SM-5GU57 12.0
GTEX-WVLH-0011-R10A-SM-3MJFM 12.0
GTEX-N7MT-0011-R10A-SM-2I3E1 11.9
GTEX-13N1W-0011-R10b-SM-5MR4H 11.7
GTEX-13X6J-0011-R10b-SM-5PNWA 11.7
GTEX-WZTO-0011-R10B-SM-4E3KB 11.7
GTEX-13QIC-0011-R10a-SM-5O9C7 11.6
GTEX-131YS-0011-R10b-SM-5EQ5N 11.5
GTEX-14BIN-0011-R10a-SM-5S2UA 11.5
GTEX-145LS-0011-R10a-SM-5PNUQ 11.4
GTEX-YFC4-0011-R10a-SM-4SOK5 11.4
GTEX-13G51-0011-R10b-SM-5LZYF 11.1
GTEX-13NZA-0011-R10b-SM-5KM54 10.9
GTEX-1313W-0011-R10b-SM-5DUXA 10.7
GTEX-145MH-0011-R10b-SM-5PNUK 10.7
GTEX-13FLW-0011-R10b-SM-5LZZF 10.6
GTEX-Z93S-0011-R10a-SM-4RGNM 10.6
GTEX-13SLX-0011-R10a-SM-5P9HV 10.4
GTEX-NL3H-0011-R10A-SM-2I3E9 10.3
GTEX-12WSH-0011-R10a-SM-5LZUS 10.2
GTEX-12WSE-0011-R10b-SM-5P9JV 9.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 9.7
GTEX-WL46-0011-R10A-SM-3MJFQ 9.6
GTEX-11ZUS-0011-R10b-SM-5BC79 9.4
GTEX-13IVO-0011-R10a-SM-5LZY3 8.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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