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PGM1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:56.4TPM
GTEx:23.0RPKM
FANTOM5:105.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA024190

  

Antibody HPA024637

  

Antibody HPA046329

  

Antibody CAB004666

  

Endothelial cells

 Medium   Low   Low   Not detected  

Glandular cells

 Not detected   Medium   Not detected   Medium  

Peripheral nerve/ganglion

 Not detected   Medium   Not detected  
       
       
       

COLON - HPA RNA-seq

Average TPM

56.4
overview Male, age 54
Sample 1
TPM: 41.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 39.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 47.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 87.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 24.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 68.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 89.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 56.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 45.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 71.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 59.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 61.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 40.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

23.0

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 17.8
Samples: 149

Max RPKM: 36
Min RPKM: 6.3
Std RPKM: 5.2
Median RPKM: 17.1
GTEX-131XG-1526-SM-5GCNQ 36.0
GTEX-13CF3-1326-SM-5LZXZ 33.5
GTEX-12WSL-1826-SM-5LZW9 32.2
GTEX-1399U-2226-SM-5KLZI 31.9
GTEX-XAJ8-0726-SM-47JY5 30.3
GTEX-13O1R-2426-SM-5KLZZ 29.3
GTEX-1339X-1726-SM-5P9J9 28.5
GTEX-11I78-1326-SM-5PNY9 27.9
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 26.9
Samples: 196

Max RPKM: 52.5
Min RPKM: 5.9
Std RPKM: 9
Median RPKM: 27.6
GTEX-1399R-2226-SM-5P9JB 52.5
GTEX-13W3W-2126-SM-5K7UX 48.1
GTEX-T5JW-1126-SM-4DM5V 47.2
GTEX-P4QT-1426-SM-3NMCX 46.1
GTEX-12BJ1-2126-SM-5BC5O 42.7
GTEX-U3ZN-2126-SM-4DXU1 41.8
GTEX-144GM-1226-SM-5LU52 41.2
GTEX-11P82-1026-SM-5BC5J 40.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

105.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 105.5
FF:10014-101C5 62,83,84 years, mixed 105.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.