We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RAB10
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:52.2TPM
GTEx:26.4RPKM
FANTOM5:109.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA045611

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

52.2

overview Male, age 65
Sample 1
TPM: 44.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 53.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 53.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 57.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

26.4

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 26.4
Samples: 88

Max RPKM: 41.5
Min RPKM: 16.3
Std RPKM: 4.6
Median RPKM: 26.4
GTEX-139YR-2226-SM-5IFFW 41.5
GTEX-13FTW-2026-SM-5IJE2 36.6
GTEX-ZLV1-1126-SM-4WWBW 36.3
GTEX-XGQ4-1326-SM-4GIDU 35.2
GTEX-WFG8-1626-SM-4LVMB 34.6
GTEX-Y5LM-1626-SM-4VDTB 33.9
GTEX-13D11-0726-SM-5LZZB 33.8
GTEX-111CU-1326-SM-5NQ8L 33.4
GTEX-145LT-1026-SM-5LU9O 31.8
GTEX-131XG-1726-SM-5LZUR 31.6
GTEX-ZF2S-1726-SM-57WFT 31.3
GTEX-ZPIC-2326-SM-57WDW 31.0
GTEX-ZTX8-0526-SM-59HLD 30.9
GTEX-ZYWO-1526-SM-5SIAL 30.8
GTEX-WFG7-1726-SM-4LVME 30.7
GTEX-ZP4G-1626-SM-57WGD 30.6
GTEX-YB5E-1526-SM-5IFIE 30.3
GTEX-1192X-2526-SM-59868 29.7
GTEX-13O21-1026-SM-5IJDU 29.6
GTEX-13PL7-2626-SM-5IFH4 29.6
GTEX-X15G-1426-SM-4PQZK 29.4
GTEX-11EQ9-1326-SM-5985X 29.4
GTEX-117YX-0326-SM-5GICL 29.2
GTEX-XXEK-1026-SM-4BRUW 29.0
GTEX-1399R-2026-SM-5K7WN 28.7
GTEX-ZPCL-1726-SM-57WEO 28.5
GTEX-ZTSS-0926-SM-59865 28.5
GTEX-Y3IK-1726-SM-4YCCR 28.4
GTEX-11P7K-1626-SM-5GU63 28.3
GTEX-12WSK-1526-SM-5CVNO 28.1
GTEX-1122O-1326-SM-5H11F 28.0
GTEX-ZTPG-2626-SM-57WFX 27.5
GTEX-ZXES-1526-SM-5NQ95 27.4
GTEX-ZQUD-0926-SM-57WE3 27.4
GTEX-11DXX-1626-SM-5H11H 27.3
GTEX-ZQG8-2526-SM-57WEQ 27.3
GTEX-ZYFG-2026-SM-5E43Y 27.2
GTEX-13113-1226-SM-5EGHT 27.0
GTEX-11P82-0826-SM-5P9GU 26.8
GTEX-14DAR-1426-SM-5RQIR 26.8
GTEX-11NSD-1726-SM-5N9C3 26.7
GTEX-1399S-2026-SM-5KM4B 26.6
GTEX-131XF-1326-SM-5GCMQ 26.5
GTEX-ZVT2-2126-SM-5NQ93 26.5
GTEX-133LE-1426-SM-5IFH1 26.3
GTEX-XMK1-1826-SM-4B66F 26.0
GTEX-1399U-2126-SM-5IFEZ 25.9
GTEX-11XUK-1426-SM-5EQMG 25.8
GTEX-XAJ8-0526-SM-47JYK 25.8
GTEX-ZVP2-1726-SM-5GU5P 25.7
GTEX-145ME-0926-SM-5O9AR 25.6
GTEX-UPK5-2026-SM-4JBIM 25.2
GTEX-YEC4-1726-SM-4W21E 25.1
GTEX-ZVZP-1826-SM-5GZXB 25.0
GTEX-13RTK-0826-SM-5Q5C6 24.9
GTEX-XBED-1426-SM-4AT4G 24.9
GTEX-11DXZ-1326-SM-5H11X 24.7
GTEX-139T6-1026-SM-5IJGC 24.7
GTEX-14E6E-1626-SM-5RQI7 24.6
GTEX-VJYA-0926-SM-4KL1N 24.6
GTEX-ZZ64-0526-SM-5GZXM 24.5
GTEX-13O61-1326-SM-5KM31 24.5
GTEX-XUZC-1426-SM-4BRV3 24.4
GTEX-WEY5-1526-SM-4LMJF 24.3
GTEX-ZEX8-1826-SM-57WBH 24.2
GTEX-13111-1426-SM-5DUW3 23.8
GTEX-YF7O-1826-SM-5IFIU 23.6
GTEX-WFJO-0926-SM-4LVM2 23.2
GTEX-Y9LG-1626-SM-5IFHM 22.7
GTEX-ZLFU-1526-SM-4WWBT 21.9
GTEX-13QBU-1926-SM-5IJEW 21.9
GTEX-11I78-1126-SM-5A5K5 21.7
GTEX-11VI4-1626-SM-5EQKO 21.6
GTEX-WQUQ-2426-SM-4MVNW 21.0
GTEX-Z9EW-0926-SM-5CVMM 21.0
GTEX-111YS-1426-SM-5GID8 20.7
GTEX-ZC5H-2326-SM-4WAYT 20.5
GTEX-X5EB-1626-SM-4E3IV 20.5
GTEX-13CF3-1226-SM-5LZXN 20.4
GTEX-13FH7-1226-SM-5IJFK 20.1
GTEX-ZA64-1226-SM-5HL7B 19.8
GTEX-Y114-1426-SM-4TT6W 19.4
GTEX-12BJ1-1926-SM-5HL9Z 19.2
GTEX-13OVI-1926-SM-5IJCG 19.1
GTEX-WRHK-1026-SM-4MVOD 19.0
GTEX-VUSG-1726-SM-4KKZL 18.9
GTEX-WH7G-1626-SM-4LVMY 17.8
GTEX-148VJ-2226-SM-5NQ9M 16.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

109.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 109.2
FF:10024-101D6 15,40,85 years, mixed 109.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.