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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.5TPM
GTEx:11.1RPKM
FANTOM5:87.1Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA031388

 

Antibody HPA031389

 

Antibody HPA031390

 

Antibody CAB025414

 

Adipocytes

Low   Not detected   Low   Not detected  

Glandular cells

High   Medium   Medium   Medium  

Myoepithelial cells

Medium   Medium   Low   Medium  
       
       
       

BREAST - HPA RNA-seq

Average TPM

22.5

overview Female, age 52
Sample 1
TPM: 16.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 21.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 29.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 22.7
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

11.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 11.1
Samples: 214

Max RPKM: 16.7
Min RPKM: 6.1
Std RPKM: 2
Median RPKM: 11
GTEX-VJWN-0726-SM-3GIJ8 16.7
GTEX-XUZC-1626-SM-4BRVP 16.5
GTEX-XYKS-1326-SM-4BRUN 16.4
GTEX-ZTTD-1026-SM-51MRD 16.0
GTEX-117YX-1426-SM-5H12H 15.8
GTEX-Y5LM-1726-SM-4VDSX 15.6
GTEX-11TT1-2126-SM-5GU5Y 15.5
GTEX-QEG5-0726-SM-4R1JQ 15.3
GTEX-13S86-1226-SM-5S2OA 15.1
GTEX-13CF3-2126-SM-5IFJP 15.0
GTEX-ZYWO-2326-SM-5GZY4 14.8
GTEX-ZU9S-1926-SM-5NQBP 14.5
GTEX-Y114-2026-SM-4TT7L 14.3
GTEX-ZDYS-1126-SM-5K7UB 14.2
GTEX-ZLFU-2126-SM-4WWEV 14.2
GTEX-14ABY-2126-SM-5QGQZ 14.0
GTEX-14E6E-1326-SM-5S2NR 14.0
GTEX-11ZTT-2326-SM-5EQLG 13.9
GTEX-13O3O-0826-SM-5K7WE 13.9
GTEX-X4XY-0926-SM-4E3JD 13.9
GTEX-XV7Q-2326-SM-4BRVZ 13.9
GTEX-T5JW-2026-SM-4DM63 13.8
GTEX-T6MN-0726-SM-32PML 13.8
GTEX-1211K-1926-SM-5EQLB 13.7
GTEX-QEL4-2126-SM-447AE 13.7
GTEX-U8XE-0826-SM-4E3J1 13.7
GTEX-PSDG-1626-SM-48TCQ 13.6
GTEX-11DZ1-0326-SM-5N9BN 13.5
GTEX-146FH-0826-SM-5SI8T 13.5
GTEX-132AR-0826-SM-5EGK6 13.4
GTEX-SE5C-2126-SM-4BRUJ 13.4
GTEX-Y5V5-2126-SM-4WWFO 13.4
GTEX-11P82-1326-SM-5HL62 13.3
GTEX-12WSN-1326-SM-5GCNT 13.3
GTEX-13PL6-2926-SM-5L3I2 13.3
GTEX-13NZ9-1026-SM-5MR5K 13.2
GTEX-13W3W-1226-SM-5LU4H 13.2
GTEX-T5JC-2126-SM-32PMO 13.2
GTEX-QDT8-0626-SM-48TYW 13.1
GTEX-1122O-1226-SM-5H113 13.0
GTEX-Y5V6-2126-SM-4WWFX 13.0
GTEX-ZQG8-0726-SM-5P9H9 13.0
GTEX-13FTY-2226-SM-5J1ND 12.9
GTEX-UTHO-1026-SM-3GAF7 12.9
GTEX-TKQ1-0226-SM-33HB5 12.8
GTEX-ZLV1-1426-SM-4WWES 12.7
GTEX-ZY6K-1626-SM-5GZWV 12.7
GTEX-13N11-1726-SM-5J1OJ 12.6
GTEX-13OW5-2226-SM-5L3HC 12.6
GTEX-R3RS-0626-SM-48FE1 12.6
GTEX-S4P3-1326-SM-4AD6V 12.6
GTEX-X261-0626-SM-3NMD9 12.6
GTEX-139T8-0826-SM-5L3DE 12.5
GTEX-WXYG-2226-SM-4E3IM 12.5
GTEX-ZVT2-1826-SM-5NQ8W 12.5
GTEX-133LE-1726-SM-5K7VQ 12.4
GTEX-13D11-1026-SM-5IJFB 12.3
GTEX-13NZ8-0126-SM-5IJCT 12.3
GTEX-Q2AG-0326-SM-48U1O 12.3
GTEX-YEC3-1026-SM-5IFI5 12.3
GTEX-ZVTK-0326-SM-51MRR 12.3
GTEX-11P7K-0726-SM-5EGKX 12.2
GTEX-ZVE2-1226-SM-5NQ8R 12.2
GTEX-11EMC-2026-SM-5A5JV 12.1
GTEX-12WSM-1726-SM-5BC6J 12.1
GTEX-13CF2-2026-SM-5K7VI 12.1
GTEX-REY6-2426-SM-48FF5 12.1
GTEX-S33H-0326-SM-4AD6N 12.1
GTEX-12ZZX-1126-SM-5EGKB 12.0
GTEX-WY7C-2726-SM-3NB3P 12.0
GTEX-ZF2S-2026-SM-5E461 12.0
GTEX-11P81-1926-SM-5BC53 11.9
GTEX-ZZPU-0626-SM-5E43T 11.9
GTEX-RWS6-1926-SM-47JXY 11.8
GTEX-S32W-2026-SM-4AD6E 11.8
GTEX-W5X1-2326-SM-3GIL6 11.8
GTEX-1117F-2826-SM-5GZXL 11.7
GTEX-13FTX-1126-SM-5N9EN 11.7
GTEX-R55F-1726-SM-2TF4R 11.7
GTEX-YFC4-1426-SM-5IFJG 11.7
GTEX-11GS4-2126-SM-5A5KR 11.6
GTEX-11I78-2226-SM-5PNYA 11.6
GTEX-11TUW-1826-SM-5BC5D 11.5
GTEX-145ME-1526-SM-5Q5F2 11.5
GTEX-S341-1526-SM-4AD6K 11.5
GTEX-WYJK-1326-SM-3NB2T 11.5
GTEX-ZAJG-0626-SM-5HL8X 11.5
GTEX-11LCK-2426-SM-5HL5F 11.3
GTEX-13QIC-2326-SM-5LU5N 11.3
GTEX-WOFL-0826-SM-3MJG1 11.3
GTEX-YFCO-1826-SM-4W1YH 11.3
GTEX-13113-1726-SM-5GCOO 11.2
GTEX-13FHO-0826-SM-5L3E8 11.2
GTEX-WYVS-1726-SM-3NMAY 11.2
GTEX-ZC5H-2626-SM-5J2MG 11.2
GTEX-ZV6S-1826-SM-5NQ8D 11.2
GTEX-ZXES-0826-SM-5E43C 11.2
GTEX-111YS-1926-SM-5GICC 11.1
GTEX-1192X-2326-SM-5987X 11.1
GTEX-11O72-2126-SM-5N9FO 11.1
GTEX-131XW-0726-SM-5EGK3 11.1
GTEX-1399U-1826-SM-5PNZ1 11.1
GTEX-TMMY-0726-SM-33HBE 11.1
GTEX-ZTX8-1226-SM-4YCE9 11.1
GTEX-ZV7C-1826-SM-5NQ83 11.1
GTEX-XUW1-2326-SM-4BOO5 11.0
GTEX-ZPIC-1126-SM-5BC7F 11.0
GTEX-11EI6-0626-SM-5985T 10.9
GTEX-11PRG-0826-SM-5EQ6A 10.9
GTEX-13NZB-2126-SM-5MR4Y 10.9
GTEX-WI4N-1426-SM-3LK7H 10.9
GTEX-Y3IK-2326-SM-4WWDT 10.9
GTEX-ZA64-1526-SM-5CVMD 10.9
GTEX-ZT9W-2026-SM-51MRA 10.9
GTEX-11EM3-1326-SM-5N9C6 10.8
GTEX-131YS-0626-SM-5EGKL 10.8
GTEX-R55D-0826-SM-48FEA 10.8
GTEX-139T6-1626-SM-5PNYZ 10.7
GTEX-13O61-1826-SM-5KM4I 10.7
GTEX-145MN-1926-SM-5SIAI 10.7
GTEX-14AS3-1626-SM-5S2OY 10.7
GTEX-RUSQ-2026-SM-4GIAK 10.7
GTEX-S4UY-0726-SM-4AD6X 10.7
GTEX-139TU-0626-SM-5KM3X 10.6
GTEX-UJHI-1426-SM-3DB9C 10.6
GTEX-XMD2-0926-SM-4WWEF 10.6
GTEX-ZDTT-2126-SM-5S2OJ 10.6
GTEX-ZVZQ-0826-SM-51MRF 10.6
GTEX-13O3P-0826-SM-5L3DH 10.5
GTEX-S4Q7-1126-SM-4AD6R 10.5
GTEX-TKQ2-1826-SM-33HB2 10.5
GTEX-U3ZH-1426-SM-4DXSR 10.5
GTEX-WRHU-0326-SM-3MJFY 10.5
GTEX-XBED-1626-SM-47JYN 10.5
GTEX-XOT4-0726-SM-4GIAW 10.5
GTEX-Y3I4-1526-SM-4TT7K 10.5
GTEX-Y9LG-1426-SM-5IFJZ 10.5
GTEX-11ONC-2126-SM-5HL6E 10.4
GTEX-145MO-0826-SM-5NQBL 10.4
GTEX-SIU7-1626-SM-4BRUK 10.3
GTEX-TML8-1226-SM-32QON 10.3
GTEX-Y8LW-1626-SM-5IFHX 10.3
GTEX-11EQ9-1826-SM-5Q5AJ 10.2
GTEX-11WQK-2426-SM-5GU5C 10.2
GTEX-145LT-0726-SM-5S2VM 10.2
GTEX-T2IS-1526-SM-32QPR 10.2
GTEX-VUSG-2226-SM-4KKZO 10.2
GTEX-X4EP-2926-SM-3P5YQ 10.2
GTEX-YJ8O-2226-SM-5IFHW 10.2
GTEX-12BJ1-1826-SM-5HL9N 10.1
GTEX-1314G-1226-SM-5BC6D 10.1
GTEX-13FTW-1426-SM-5LZWZ 10.1
GTEX-T6MO-0326-SM-32QOK 10.1
GTEX-UPK5-2326-SM-3P5Z8 10.1
GTEX-12WSK-2226-SM-5GCO5 10.0
GTEX-Y111-2026-SM-4SOJA 9.9
GTEX-Y8E4-1626-SM-5S2MW 9.9
GTEX-ZDXO-0126-SM-5S2ND 9.9
GTEX-147F4-2826-SM-5NQBN 9.8
GTEX-XQ8I-2426-SM-4WAXY 9.8
GTEX-11WQC-1726-SM-5GU4W 9.7
GTEX-1313W-0826-SM-5EQ4T 9.7
GTEX-RU72-0626-SM-46MUI 9.7
GTEX-U3ZN-1926-SM-4DXSG 9.7
GTEX-ZF29-1926-SM-5S2P1 9.7
GTEX-R53T-1526-SM-48FEK 9.6
GTEX-1269C-2426-SM-5FQSN 9.5
GTEX-X15G-1626-SM-3NMB3 9.5
GTEX-XUJ4-1926-SM-4BOOV 9.5
GTEX-ZYW4-0826-SM-5GIDG 9.5
GTEX-11DXW-0626-SM-5N9ER 9.4
GTEX-WFON-1826-SM-3GILG 9.4
GTEX-YB5K-1626-SM-5IFIN 9.4
GTEX-12KS4-0126-SM-5Q5A5 9.3
GTEX-ZAB4-2526-SM-5HL8M 9.3
GTEX-ZF3C-2326-SM-5S2MZ 9.3
GTEX-ZZ64-1226-SM-5E43R 9.1
GTEX-132NY-0826-SM-5K7Y7 9.0
GTEX-13PVQ-1026-SM-5KM3M 9.0
GTEX-T2YK-2226-SM-32QPT 9.0
GTEX-ZEX8-2226-SM-57WC6 9.0
GTEX-11ZUS-0826-SM-5FQUY 8.9
GTEX-13N1W-0626-SM-5MR4U 8.9
GTEX-QMRM-1626-SM-4R1KV 8.9
GTEX-YB5E-1726-SM-5IFJ3 8.9
GTEX-12WSB-0626-SM-59HJO 8.8
GTEX-13O3Q-2226-SM-5KM4O 8.8
GTEX-WYBS-0926-SM-3NM94 8.8
GTEX-XGQ4-0926-SM-4AT4U 8.8
GTEX-ZVT4-1026-SM-57WC4 8.8
GTEX-13OW8-0226-SM-5K7UP 8.7
GTEX-ZYFC-0826-SM-5E44K 8.7
GTEX-11DXZ-1926-SM-5GZZL 8.5
GTEX-QVJO-1826-SM-447C9 8.4
GTEX-ZUA1-1526-SM-59HLS 8.4
GTEX-ZWKS-2826-SM-5NQ74 8.4
GTEX-13W46-0826-SM-5LU3H 8.3
GTEX-144GM-0926-SM-5O994 8.3
GTEX-ZYT6-0126-SM-5E45J 8.3
GTEX-11NSD-0926-SM-5N9DR 8.2
GTEX-11OF3-1926-SM-59889 8.2
GTEX-144GL-2026-SM-5LU3O 8.2
GTEX-ZQUD-1926-SM-51MSA 8.2
GTEX-14753-2426-SM-5LU8U 7.9
GTEX-XMD1-0826-SM-4AT52 7.9
GTEX-132Q8-1426-SM-5EGK7 7.8
GTEX-S7SE-0826-SM-4AT4D 7.8
GTEX-11NV4-2026-SM-5N9DG 7.7
GTEX-U412-1826-SM-4DXTJ 7.7
GTEX-11DXY-2326-SM-5GICW 7.6
GTEX-XQ3S-1326-SM-4BOPQ 7.6
GTEX-11GSO-1926-SM-5A5K3 7.1
GTEX-117XS-1926-SM-5GICO 6.5
GTEX-XMK1-1126-SM-4IHJ8 6.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

87.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 87.1
FF:10080-102A8 77 years, female 87.1

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