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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.3TPM
GTEx:16.6RPKM
FANTOM5:67.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA031388

 

Antibody HPA031389

 

Antibody HPA031390

 

Antibody CAB025414

 

Glandular cells

High   High   Medium   Medium  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

32.3

overview Male, age 65
Sample 1
TPM: 27.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 30.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 38.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 34.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

16.6

GTEx sample id

RPKM

13.116.320.17.029.10246810121416182022242628
 
13.116.320.17.029.10246810121416182022242628

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 16.6
Samples: 88

Max RPKM: 29.1
Min RPKM: 7
Std RPKM: 4.8
Median RPKM: 16.3
GTEX-Y5LM-1626-SM-4VDTB 29.1
GTEX-139YR-2226-SM-5IFFW 27.8
GTEX-13FTW-2026-SM-5IJE2 27.0
GTEX-XGQ4-1326-SM-4GIDU 26.4
GTEX-ZYWO-1526-SM-5SIAL 23.5
GTEX-YB5E-1526-SM-5IFIE 23.3
GTEX-ZYFG-2026-SM-5E43Y 23.3
GTEX-145LT-1026-SM-5LU9O 22.8
GTEX-ZP4G-1626-SM-57WGD 22.6
GTEX-131XG-1726-SM-5LZUR 21.9
GTEX-ZTX8-0526-SM-59HLD 21.8
GTEX-XUZC-1426-SM-4BRV3 21.8
GTEX-ZLV1-1126-SM-4WWBW 21.3
GTEX-WFG8-1626-SM-4LVMB 21.1
GTEX-ZTPG-2626-SM-57WFX 20.9
GTEX-ZXES-1526-SM-5NQ95 20.9
GTEX-139T6-1026-SM-5IJGC 20.6
GTEX-ZA64-1226-SM-5HL7B 20.5
GTEX-133LE-1426-SM-5IFH1 20.5
GTEX-1399R-2026-SM-5K7WN 20.5
GTEX-WQUQ-2426-SM-4MVNW 20.4
GTEX-131XF-1326-SM-5GCMQ 20.2
GTEX-XAJ8-0526-SM-47JYK 20.0
GTEX-13RTK-0826-SM-5Q5C6 19.6
GTEX-13D11-0726-SM-5LZZB 19.5
GTEX-13PL7-2626-SM-5IFH4 19.4
GTEX-XXEK-1026-SM-4BRUW 19.1
GTEX-ZVT2-2126-SM-5NQ93 19.1
GTEX-11EQ9-1326-SM-5985X 19.0
GTEX-14DAR-1426-SM-5RQIR 18.9
GTEX-1122O-1326-SM-5H11F 18.7
GTEX-11DXZ-1326-SM-5H11X 18.4
GTEX-13CF3-1226-SM-5LZXN 18.3
GTEX-X5EB-1626-SM-4E3IV 18.3
GTEX-13113-1226-SM-5EGHT 18.3
GTEX-1399U-2126-SM-5IFEZ 18.1
GTEX-ZEX8-1826-SM-57WBH 18.0
GTEX-XBED-1426-SM-4AT4G 17.9
GTEX-14E6E-1626-SM-5RQI7 17.3
GTEX-ZVZP-1826-SM-5GZXB 17.1
GTEX-11DXX-1626-SM-5H11H 17.0
GTEX-Z9EW-0926-SM-5CVMM 16.8
GTEX-13O21-1026-SM-5IJDU 16.6
GTEX-VJYA-0926-SM-4KL1N 16.4
GTEX-ZPIC-2326-SM-57WDW 16.1
GTEX-ZZ64-0526-SM-5GZXM 16.0
GTEX-WFJO-0926-SM-4LVM2 15.9
GTEX-11NSD-1726-SM-5N9C3 15.8
GTEX-ZPCL-1726-SM-57WEO 15.7
GTEX-WFG7-1726-SM-4LVME 15.7
GTEX-Y9LG-1626-SM-5IFHM 15.6
GTEX-ZVP2-1726-SM-5GU5P 15.5
GTEX-11P82-0826-SM-5P9GU 15.5
GTEX-ZTSS-0926-SM-59865 15.5
GTEX-11P7K-1626-SM-5GU63 15.3
GTEX-13O61-1326-SM-5KM31 14.8
GTEX-YF7O-1826-SM-5IFIU 14.8
GTEX-ZQG8-2526-SM-57WEQ 14.7
GTEX-Y3IK-1726-SM-4YCCR 14.6
GTEX-ZLFU-1526-SM-4WWBT 14.6
GTEX-11XUK-1426-SM-5EQMG 14.4
GTEX-11I78-1126-SM-5A5K5 14.3
GTEX-WRHK-1026-SM-4MVOD 14.0
GTEX-X15G-1426-SM-4PQZK 13.5
GTEX-111YS-1426-SM-5GID8 13.4
GTEX-11VI4-1626-SM-5EQKO 13.1
GTEX-WH7G-1626-SM-4LVMY 13.0
GTEX-13FH7-1226-SM-5IJFK 12.9
GTEX-YEC4-1726-SM-4W21E 12.7
GTEX-1399S-2026-SM-5KM4B 12.7
GTEX-145ME-0926-SM-5O9AR 12.6
GTEX-13QBU-1926-SM-5IJEW 12.5
GTEX-117YX-0326-SM-5GICL 12.1
GTEX-UPK5-2026-SM-4JBIM 11.9
GTEX-12WSK-1526-SM-5CVNO 11.7
GTEX-Y114-1426-SM-4TT6W 10.9
GTEX-12BJ1-1926-SM-5HL9Z 10.7
GTEX-13111-1426-SM-5DUW3 10.4
GTEX-111CU-1326-SM-5NQ8L 10.1
GTEX-148VJ-2226-SM-5NQ9M 9.2
GTEX-ZQUD-0926-SM-57WE3 9.1
GTEX-VUSG-1726-SM-4KKZL 8.6
GTEX-ZF2S-1726-SM-57WFT 8.4
GTEX-1192X-2526-SM-59868 8.3
GTEX-WEY5-1526-SM-4LMJF 7.8
GTEX-ZC5H-2326-SM-4WAYT 7.7
GTEX-13OVI-1926-SM-5IJCG 7.4
GTEX-XMK1-1826-SM-4B66F 7.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

67.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 67.3
FF:10024-101D6 15,40,85 years, mixed 67.3

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