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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:36.8TPM
GTEx:36.8RPKM
FANTOM5:66.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA040870

 

Antibody CAB034261

 

Adipocytes

Not detected   Low  

Glandular cells

High   Low  

Myoepithelial cells

High   Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

36.8

overview Female, age 52
Sample 1
TPM: 28.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 33.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 43.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 41.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

36.8

GTEx sample id

RPKM

31.835.740.221.251.90102030405060708090100
 
31.835.740.221.251.90102030405060708090100

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 36.8
Samples: 214

Max RPKM: 103.2
Min RPKM: 19
Std RPKM: 8.7
Median RPKM: 35.7
GTEX-X4XY-0926-SM-4E3JD 103.2
GTEX-XYKS-1326-SM-4BRUN 80.3
GTEX-RUSQ-2026-SM-4GIAK 60.1
GTEX-11WQK-2426-SM-5GU5C 56.6
GTEX-13CF3-2126-SM-5IFJP 55.2
GTEX-QEG5-0726-SM-4R1JQ 54.0
GTEX-13W46-0826-SM-5LU3H 53.1
GTEX-13NZ9-1026-SM-5MR5K 53.0
GTEX-R3RS-0626-SM-48FE1 51.9
GTEX-XV7Q-2326-SM-4BRVZ 51.8
GTEX-132AR-0826-SM-5EGK6 50.9
GTEX-Y5V6-2126-SM-4WWFX 49.9
GTEX-ZTTD-1026-SM-51MRD 49.6
GTEX-13S86-1226-SM-5S2OA 48.8
GTEX-SE5C-2126-SM-4BRUJ 48.7
GTEX-ZU9S-1926-SM-5NQBP 47.5
GTEX-VUSG-2226-SM-4KKZO 47.1
GTEX-Y5LM-1726-SM-4VDSX 46.9
GTEX-ZDYS-1126-SM-5K7UB 46.9
GTEX-11DZ1-0326-SM-5N9BN 46.6
GTEX-YEC3-1026-SM-5IFI5 46.6
GTEX-11P82-1326-SM-5HL62 46.5
GTEX-146FH-0826-SM-5SI8T 46.0
GTEX-X15G-1626-SM-3NMB3 45.8
GTEX-WOFL-0826-SM-3MJG1 45.7
GTEX-U8XE-0826-SM-4E3J1 45.5
GTEX-X261-0626-SM-3NMD9 45.5
GTEX-13W3W-1226-SM-5LU4H 45.3
GTEX-13NZ8-0126-SM-5IJCT 44.1
GTEX-TKQ2-1826-SM-33HB2 44.0
GTEX-ZYWO-2326-SM-5GZY4 44.0
GTEX-ZY6K-1626-SM-5GZWV 43.3
GTEX-133LE-1726-SM-5K7VQ 43.2
GTEX-R55D-0826-SM-48FEA 43.2
GTEX-Y114-2026-SM-4TT7L 43.1
GTEX-1117F-2826-SM-5GZXL 43.0
GTEX-13FTY-2226-SM-5J1ND 42.9
GTEX-13PL6-2926-SM-5L3I2 42.9
GTEX-XUZC-1626-SM-4BRVP 42.9
GTEX-UPK5-2326-SM-3P5Z8 42.5
GTEX-13O3Q-2226-SM-5KM4O 42.2
GTEX-S33H-0326-SM-4AD6N 42.2
GTEX-XGQ4-0926-SM-4AT4U 42.1
GTEX-13OW5-2226-SM-5L3HC 41.8
GTEX-13D11-1026-SM-5IJFB 41.5
GTEX-R53T-1526-SM-48FEK 41.5
GTEX-11ZTT-2326-SM-5EQLG 41.3
GTEX-12ZZX-1126-SM-5EGKB 40.9
GTEX-XMD2-0926-SM-4WWEF 40.8
GTEX-YB5K-1626-SM-5IFIN 40.7
GTEX-11I78-2226-SM-5PNYA 40.6
GTEX-11NSD-0926-SM-5N9DR 40.6
GTEX-YFCO-1826-SM-4W1YH 40.5
GTEX-ZQUD-1926-SM-51MSA 40.2
GTEX-REY6-2426-SM-48FF5 40.1
GTEX-13O3P-0826-SM-5L3DH 39.9
GTEX-ZAJG-0626-SM-5HL8X 39.9
GTEX-RWS6-1926-SM-47JXY 39.8
GTEX-Y8E4-1626-SM-5S2MW 39.7
GTEX-T5JW-2026-SM-4DM63 39.4
GTEX-1192X-2326-SM-5987X 39.2
GTEX-14E6E-1326-SM-5S2NR 39.0
GTEX-13FTW-1426-SM-5LZWZ 38.9
GTEX-UJHI-1426-SM-3DB9C 38.9
GTEX-ZDXO-0126-SM-5S2ND 38.9
GTEX-13CF2-2026-SM-5K7VI 38.5
GTEX-QEL4-2126-SM-447AE 38.2
GTEX-XQ8I-2426-SM-4WAXY 38.1
GTEX-145MO-0826-SM-5NQBL 38.0
GTEX-SIU7-1626-SM-4BRUK 38.0
GTEX-T2YK-2226-SM-32QPT 38.0
GTEX-11EMC-2026-SM-5A5JV 37.7
GTEX-11EI6-0626-SM-5985T 37.5
GTEX-ZT9W-2026-SM-51MRA 37.5
GTEX-1122O-1226-SM-5H113 37.4
GTEX-13O3O-0826-SM-5K7WE 37.4
GTEX-ZF2S-2026-SM-5E461 37.3
GTEX-QMRM-1626-SM-4R1KV 37.1
GTEX-11P7K-0726-SM-5EGKX 37.0
GTEX-S341-1526-SM-4AD6K 37.0
GTEX-ZZ64-1226-SM-5E43R 37.0
GTEX-WYVS-1726-SM-3NMAY 36.9
GTEX-XUJ4-1926-SM-4BOOV 36.9
GTEX-VJWN-0726-SM-3GIJ8 36.8
GTEX-WXYG-2226-SM-4E3IM 36.7
GTEX-11DXW-0626-SM-5N9ER 36.6
GTEX-145ME-1526-SM-5Q5F2 36.6
GTEX-13NZB-2126-SM-5MR4Y 36.5
GTEX-S32W-2026-SM-4AD6E 36.5
GTEX-Y5V5-2126-SM-4WWFO 36.5
GTEX-X4EP-2926-SM-3P5YQ 36.4
GTEX-ZLV1-1426-SM-4WWES 36.4
GTEX-11GS4-2126-SM-5A5KR 36.3
GTEX-1211K-1926-SM-5EQLB 36.3
GTEX-Y111-2026-SM-4SOJA 36.3
GTEX-YFC4-1426-SM-5IFJG 36.3
GTEX-12KS4-0126-SM-5Q5A5 36.1
GTEX-ZVTK-0326-SM-51MRR 36.1
GTEX-147F4-2826-SM-5NQBN 36.0
GTEX-ZTX8-1226-SM-4YCE9 36.0
GTEX-ZV6S-1826-SM-5NQ8D 36.0
GTEX-139TU-0626-SM-5KM3X 35.9
GTEX-UTHO-1026-SM-3GAF7 35.9
GTEX-ZVE2-1226-SM-5NQ8R 35.9
GTEX-U3ZN-1926-SM-4DXSG 35.8
GTEX-12WSN-1326-SM-5GCNT 35.7
GTEX-T6MN-0726-SM-32PML 35.7
GTEX-XQ3S-1326-SM-4BOPQ 35.7
GTEX-S4Q7-1126-SM-4AD6R 35.6
GTEX-U3ZH-1426-SM-4DXSR 35.6
GTEX-13N11-1726-SM-5J1OJ 35.5
GTEX-XUW1-2326-SM-4BOO5 35.5
GTEX-T5JC-2126-SM-32PMO 35.4
GTEX-S4P3-1326-SM-4AD6V 35.3
GTEX-ZLFU-2126-SM-4WWEV 35.3
GTEX-11P81-1926-SM-5BC53 35.2
GTEX-11WQC-1726-SM-5GU4W 35.2
GTEX-139T6-1626-SM-5PNYZ 35.2
GTEX-XOT4-0726-SM-4GIAW 35.0
GTEX-14ABY-2126-SM-5QGQZ 34.9
GTEX-ZC5H-2626-SM-5J2MG 34.8
GTEX-12WSB-0626-SM-59HJO 34.6
GTEX-Q2AG-0326-SM-48U1O 34.6
GTEX-QVJO-1826-SM-447C9 34.6
GTEX-11ONC-2126-SM-5HL6E 34.5
GTEX-11ZUS-0826-SM-5FQUY 34.5
GTEX-ZEX8-2226-SM-57WC6 34.5
GTEX-WI4N-1426-SM-3LK7H 34.4
GTEX-11TT1-2126-SM-5GU5Y 34.3
GTEX-QDT8-0626-SM-48TYW 34.2
GTEX-13O61-1826-SM-5KM4I 34.0
GTEX-11OF3-1926-SM-59889 33.9
GTEX-1399U-1826-SM-5PNZ1 33.9
GTEX-131YS-0626-SM-5EGKL 33.8
GTEX-13FTX-1126-SM-5N9EN 33.8
GTEX-WY7C-2726-SM-3NB3P 33.8
GTEX-ZZPU-0626-SM-5E43T 33.8
GTEX-YJ8O-2226-SM-5IFHW 33.7
GTEX-RU72-0626-SM-46MUI 33.6
GTEX-ZWKS-2826-SM-5NQ74 33.6
GTEX-TMMY-0726-SM-33HBE 33.5
GTEX-ZDTT-2126-SM-5S2OJ 33.5
GTEX-11LCK-2426-SM-5HL5F 33.4
GTEX-XBED-1626-SM-47JYN 33.4
GTEX-11TUW-1826-SM-5BC5D 33.3
GTEX-WYBS-0926-SM-3NM94 33.2
GTEX-ZYFC-0826-SM-5E44K 33.1
GTEX-R55F-1726-SM-2TF4R 33.0
GTEX-144GL-2026-SM-5LU3O 32.8
GTEX-145MN-1926-SM-5SIAI 32.8
GTEX-11O72-2126-SM-5N9FO 32.6
GTEX-TML8-1226-SM-32QON 32.5
GTEX-WRHU-0326-SM-3MJFY 32.5
GTEX-ZQG8-0726-SM-5P9H9 32.4
GTEX-ZYT6-0126-SM-5E45J 32.4
GTEX-ZA64-1526-SM-5CVMD 32.3
GTEX-ZV7C-1826-SM-5NQ83 32.3
GTEX-ZVZQ-0826-SM-51MRF 32.3
GTEX-11DXZ-1926-SM-5GZZL 32.2
GTEX-11EQ9-1826-SM-5Q5AJ 31.8
GTEX-11PRG-0826-SM-5EQ6A 31.8
GTEX-132Q8-1426-SM-5EGK7 31.8
GTEX-13OW8-0226-SM-5K7UP 31.6
GTEX-Y8LW-1626-SM-5IFHX 31.6
GTEX-12WSM-1726-SM-5BC6J 31.4
GTEX-Y3IK-2326-SM-4WWDT 31.3
GTEX-ZAB4-2526-SM-5HL8M 31.3
GTEX-T6MO-0326-SM-32QOK 31.2
GTEX-1269C-2426-SM-5FQSN 31.1
GTEX-YB5E-1726-SM-5IFJ3 31.1
GTEX-12BJ1-1826-SM-5HL9N 30.9
GTEX-WYJK-1326-SM-3NB2T 30.9
GTEX-ZF29-1926-SM-5S2P1 30.9
GTEX-1313W-0826-SM-5EQ4T 30.8
GTEX-111YS-1926-SM-5GICC 30.7
GTEX-WFON-1826-SM-3GILG 30.7
GTEX-S7SE-0826-SM-4AT4D 30.4
GTEX-XMD1-0826-SM-4AT52 30.1
GTEX-11DXY-2326-SM-5GICW 30.0
GTEX-Y9LG-1426-SM-5IFJZ 29.9
GTEX-S4UY-0726-SM-4AD6X 29.8
GTEX-117YX-1426-SM-5H12H 29.7
GTEX-ZUA1-1526-SM-59HLS 29.7
GTEX-13QIC-2326-SM-5LU5N 29.6
GTEX-11NV4-2026-SM-5N9DG 29.5
GTEX-13113-1726-SM-5GCOO 29.5
GTEX-ZPIC-1126-SM-5BC7F 29.4
GTEX-PSDG-1626-SM-48TCQ 29.2
GTEX-XMK1-1126-SM-4IHJ8 29.0
GTEX-W5X1-2326-SM-3GIL6 28.8
GTEX-Y3I4-1526-SM-4TT7K 28.6
GTEX-14AS3-1626-SM-5S2OY 28.5
GTEX-TKQ1-0226-SM-33HB5 28.4
GTEX-ZYW4-0826-SM-5GIDG 28.4
GTEX-T2IS-1526-SM-32QPR 28.3
GTEX-ZXES-0826-SM-5E43C 28.3
GTEX-ZF3C-2326-SM-5S2MZ 28.1
GTEX-139T8-0826-SM-5L3DE 28.0
GTEX-1314G-1226-SM-5BC6D 27.9
GTEX-ZVT2-1826-SM-5NQ8W 27.8
GTEX-131XW-0726-SM-5EGK3 27.2
GTEX-144GM-0926-SM-5O994 27.0
GTEX-145LT-0726-SM-5S2VM 26.4
GTEX-13N1W-0626-SM-5MR4U 26.3
GTEX-132NY-0826-SM-5K7Y7 26.2
GTEX-12WSK-2226-SM-5GCO5 25.6
GTEX-ZVT4-1026-SM-57WC4 25.1
GTEX-11GSO-1926-SM-5A5K3 25.0
GTEX-11EM3-1326-SM-5N9C6 24.9
GTEX-13FHO-0826-SM-5L3E8 24.9
GTEX-13PVQ-1026-SM-5KM3M 24.1
GTEX-14753-2426-SM-5LU8U 21.7
GTEX-U412-1826-SM-4DXTJ 21.2
GTEX-117XS-1926-SM-5GICO 19.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

66.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 66.9
FF:10080-102A8 77 years, female 66.9

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