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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.6TPM
GTEx:26.9RPKM
FANTOM5:48.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA040870

 

Antibody CAB034261

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

31.6

overview Male, age 65
Sample 1
TPM: 33.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 31.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 32.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 28.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

26.9

GTEx sample id

RPKM

21.125.330.412.442.9051015202530354045505560
 
21.125.330.412.442.9051015202530354045505560

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 26.9
Samples: 88

Max RPKM: 60.7
Min RPKM: 12.4
Std RPKM: 8.3
Median RPKM: 25.3
GTEX-VJYA-0926-SM-4KL1N 60.7
GTEX-X15G-1426-SM-4PQZK 46.8
GTEX-Y5LM-1626-SM-4VDTB 45.0
GTEX-ZQUD-0926-SM-57WE3 42.9
GTEX-UPK5-2026-SM-4JBIM 42.6
GTEX-13111-1426-SM-5DUW3 41.4
GTEX-ZF2S-1726-SM-57WFT 40.0
GTEX-WFG8-1626-SM-4LVMB 39.3
GTEX-117YX-0326-SM-5GICL 38.9
GTEX-131XG-1726-SM-5LZUR 38.8
GTEX-111CU-1326-SM-5NQ8L 37.3
GTEX-VUSG-1726-SM-4KKZL 36.6
GTEX-1192X-2526-SM-59868 36.4
GTEX-ZQG8-2526-SM-57WEQ 36.2
GTEX-XXEK-1026-SM-4BRUW 35.5
GTEX-Y3IK-1726-SM-4YCCR 34.8
GTEX-XMK1-1826-SM-4B66F 34.0
GTEX-11NSD-1726-SM-5N9C3 33.1
GTEX-ZTPG-2626-SM-57WFX 33.1
GTEX-ZP4G-1626-SM-57WGD 32.9
GTEX-ZEX8-1826-SM-57WBH 31.4
GTEX-13OVI-1926-SM-5IJCG 30.8
GTEX-Z9EW-0926-SM-5CVMM 30.3
GTEX-139YR-2226-SM-5IFFW 30.3
GTEX-WEY5-1526-SM-4LMJF 30.1
GTEX-145ME-0926-SM-5O9AR 29.9
GTEX-XGQ4-1326-SM-4GIDU 29.4
GTEX-13CF3-1226-SM-5LZXN 29.0
GTEX-XAJ8-0526-SM-47JYK 28.7
GTEX-12WSK-1526-SM-5CVNO 28.2
GTEX-13O61-1326-SM-5KM31 27.6
GTEX-ZVP2-1726-SM-5GU5P 27.5
GTEX-ZPIC-2326-SM-57WDW 27.1
GTEX-1399R-2026-SM-5K7WN 26.4
GTEX-11DXX-1626-SM-5H11H 26.4
GTEX-13RTK-0826-SM-5Q5C6 26.4
GTEX-13O21-1026-SM-5IJDU 26.2
GTEX-11VI4-1626-SM-5EQKO 26.0
GTEX-WFJO-0926-SM-4LVM2 25.8
GTEX-Y114-1426-SM-4TT6W 25.8
GTEX-133LE-1426-SM-5IFH1 25.6
GTEX-11P82-0826-SM-5P9GU 25.4
GTEX-WFG7-1726-SM-4LVME 25.4
GTEX-ZC5H-2326-SM-4WAYT 25.3
GTEX-13FTW-2026-SM-5IJE2 25.3
GTEX-WH7G-1626-SM-4LVMY 24.8
GTEX-XBED-1426-SM-4AT4G 24.8
GTEX-11XUK-1426-SM-5EQMG 24.6
GTEX-YB5E-1526-SM-5IFIE 24.6
GTEX-ZLFU-1526-SM-4WWBT 24.5
GTEX-ZYFG-2026-SM-5E43Y 24.4
GTEX-139T6-1026-SM-5IJGC 24.3
GTEX-ZLV1-1126-SM-4WWBW 23.8
GTEX-148VJ-2226-SM-5NQ9M 23.7
GTEX-13113-1226-SM-5EGHT 23.4
GTEX-11P7K-1626-SM-5GU63 23.3
GTEX-13QBU-1926-SM-5IJEW 23.2
GTEX-131XF-1326-SM-5GCMQ 23.0
GTEX-WQUQ-2426-SM-4MVNW 22.8
GTEX-ZVT2-2126-SM-5NQ93 22.8
GTEX-13FH7-1226-SM-5IJFK 22.2
GTEX-145LT-1026-SM-5LU9O 22.2
GTEX-14E6E-1626-SM-5RQI7 21.7
GTEX-ZYWO-1526-SM-5SIAL 21.6
GTEX-11DXZ-1326-SM-5H11X 21.4
GTEX-11EQ9-1326-SM-5985X 21.1
GTEX-X5EB-1626-SM-4E3IV 21.1
GTEX-12BJ1-1926-SM-5HL9Z 21.1
GTEX-13D11-0726-SM-5LZZB 21.0
GTEX-XUZC-1426-SM-4BRV3 20.7
GTEX-1399U-2126-SM-5IFEZ 20.2
GTEX-1399S-2026-SM-5KM4B 20.0
GTEX-11I78-1126-SM-5A5K5 20.0
GTEX-ZVZP-1826-SM-5GZXB 19.7
GTEX-WRHK-1026-SM-4MVOD 18.7
GTEX-ZXES-1526-SM-5NQ95 18.4
GTEX-ZTX8-0526-SM-59HLD 18.4
GTEX-ZZ64-0526-SM-5GZXM 18.1
GTEX-YEC4-1726-SM-4W21E 17.6
GTEX-ZPCL-1726-SM-57WEO 17.3
GTEX-ZA64-1226-SM-5HL7B 17.0
GTEX-YF7O-1826-SM-5IFIU 16.8
GTEX-1122O-1326-SM-5H11F 16.4
GTEX-ZTSS-0926-SM-59865 16.3
GTEX-14DAR-1426-SM-5RQIR 16.3
GTEX-13PL7-2626-SM-5IFH4 15.8
GTEX-Y9LG-1626-SM-5IFHM 14.5
GTEX-111YS-1426-SM-5GID8 12.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

48.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 48.4
FF:10024-101D6 15,40,85 years, mixed 48.4

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The Human Protein Atlas project is funded
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